Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.
☆44Jul 25, 2018Updated 7 years ago
Alternatives and similar repositories for segmentation
Users that are interested in segmentation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Jupyter Notebooks for the Image Data Resource☆19Feb 20, 2026Updated 3 months ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- Curated metadata for all studies published in the Image Data Resource☆16May 19, 2026Updated 3 weeks ago
- Good Features to Correlate for Visual Tracking☆17Jul 17, 2018Updated 7 years ago
- MATLAB functions to plot 2D or 3D radiation & scattering patterns, intended for custom visualization of the response of antennas & metasu…☆22May 30, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Morphological profiling using deep learning☆126Updated this week
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆14Jan 14, 2018Updated 8 years ago
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Apr 30, 2017Updated 9 years ago
- ☆40Jul 6, 2017Updated 8 years ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 2 years ago
- Active Deep Learning for Medical Imaging Segmentation☆280Nov 22, 2022Updated 3 years ago
- Code accompanying our ICVGIP 2016 paper☆16May 17, 2017Updated 9 years ago
- The ParaView Tutorial LaTeX document☆13May 11, 2015Updated 11 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- about algorithm(关于算法)☆10Jan 26, 2020Updated 6 years ago
- Single-cell fluorescence microscopy data analysis☆26Jul 22, 2021Updated 4 years ago
- ☆13Nov 9, 2015Updated 10 years ago
- Shareable project for: Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States☆10Nov 11, 2020Updated 5 years ago
- An open-source handbook of applied guidance and tools for sustainable software development and maintenance.☆24Jun 1, 2026Updated last week
- RCWA simulation of metasurface library☆10Jun 20, 2023Updated 2 years ago
- Inverse design of metasurface using Generative Adversarial Neural Network☆11Sep 8, 2022Updated 3 years ago
- Harmonize high-content image analysis tool outputs for processing with Pycytominer and other Cytomining tools.☆19Jun 3, 2026Updated last week
- fast modified discrete cosine transform (MDCT and IMDCT) for the Julia language☆12Nov 2, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Simulation code for paper on "Electromagnetic Based Communication Model for Dynamic Metasurface Antennas".☆13Apr 25, 2022Updated 4 years ago
- Volumetric data sampler and streamer for training 3D deep learning models.☆15Mar 31, 2017Updated 9 years ago
- ElVis is a visualization system created for the accurate and interactive visualization of scalar fields produced by high-order spectral/h…☆14Oct 13, 2020Updated 5 years ago
- A simulator for single molecule FRET experiments of freely diffusing particles. Moved to:☆18Jun 13, 2019Updated 7 years ago
- 2,3d type1,2 nonuniform FFT on GPU☆12Jan 26, 2021Updated 5 years ago
- Set of IJulia notebooks modeling different aspects of the world☆15Dec 13, 2018Updated 7 years ago
- A Julia-based solver for partial-differential equations.☆13Aug 30, 2019Updated 6 years ago
- GitHub for CPSC298☆11Aug 4, 2019Updated 6 years ago
- Joint Sequence Learning for Brain Tumor Segmentation☆12Oct 5, 2017Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Computational geometry with affine transformations☆20Sep 16, 2017Updated 8 years ago
- Numerical Simulation and Visualization of 2D Rayleigh--Bénard Convection [Qt, VTK, OpenFOAM]☆12Dec 23, 2018Updated 7 years ago
- 2021 SJTU IPP Project, Metasurface, advised by Prof. Xuyang Lu☆13Mar 30, 2022Updated 4 years ago
- Smooth image transformations for complex shapes☆12Feb 8, 2020Updated 6 years ago
- Predicting Cell Health with Morphological Profiles☆41Jan 26, 2022Updated 4 years ago
- Implementation of discrete version of GS-algorithm for metasurface holography☆12Apr 16, 2020Updated 6 years ago
- R package for DNA methylation analysis☆20Aug 18, 2024Updated last year