Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.
☆44Jul 25, 2018Updated 8 years ago
Alternatives and similar repositories for segmentation
Users that are interested in segmentation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Jupyter Notebooks for the Image Data Resource☆19Jun 25, 2026Updated 2 months ago
- Supporting data files, documentation, and updated tips for the Cell Painting protocol☆22Dec 3, 2021Updated 4 years ago
- Curated metadata for all studies published in the Image Data Resource☆17May 19, 2026Updated 3 months ago
- Algorithm for round cells identification in the brightfield microscopy images.☆22Aug 19, 2023Updated 3 years ago
- Morphological profiling using deep learning☆129Aug 5, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…☆50Apr 30, 2017Updated 9 years ago
- A flexible Julia toolkit for high-dimensional cellular profiles☆13Jul 14, 2023Updated 3 years ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- Ideas, code and results of the 2018 CytoData hackathon☆13Jan 23, 2024Updated 2 years ago
- Active Deep Learning for Medical Imaging Segmentation☆280Nov 22, 2022Updated 3 years ago
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs☆11Dec 21, 2019Updated 6 years ago
- The ParaView Tutorial LaTeX document☆13May 11, 2015Updated 11 years ago
- CNTK implementation of Fully Convolutional Networks (FCN) with ResNet for semantic segmentation☆12Aug 18, 2017Updated 9 years ago
- fast modified discrete cosine transform (MDCT and IMDCT) for the Julia language☆12Nov 2, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The simplest bash calculator.☆10Jan 13, 2018Updated 8 years ago
- Electronic structure calculations using Julia☆14Dec 7, 2021Updated 4 years ago
- Volumetric data sampler and streamer for training 3D deep learning models.☆15Mar 31, 2017Updated 9 years ago
- Code for CHAMMI-75 - ICLR 2026☆18Jun 29, 2026Updated 2 months ago
- ElVis is a visualization system created for the accurate and interactive visualization of scalar fields produced by high-order spectral/h…☆14Oct 13, 2020Updated 5 years ago
- A course project that detect cells in image by a simple full convolution neural network. The project is driven by TensorFlow.☆20Jun 6, 2017Updated 9 years ago
- A Julia Tutorial☆12Mar 5, 2015Updated 11 years ago
- Set of IJulia notebooks modeling different aspects of the world☆15Dec 13, 2018Updated 7 years ago
- Computational geometry with affine transformations☆20Sep 16, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Julia-based solver for partial-differential equations.☆13Aug 30, 2019Updated 7 years ago
- Predicting Cell Health with Morphological Profiles☆41Jan 26, 2022Updated 4 years ago
- Joint Sequence Learning for Brain Tumor Segmentation☆12Oct 5, 2017Updated 8 years ago
- ☆17Oct 21, 2018Updated 7 years ago
- A simulation software for anisotropic grain growth in 2D☆11Feb 17, 2017Updated 9 years ago
- Multiphysics Object Oriented Simulation Environment In Julia☆17Dec 18, 2016Updated 9 years ago
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- Automatically exported from code.google.com/p/iocbio☆16Aug 5, 2015Updated 11 years ago
- Computational Statistical Mechanics Tutorials☆15Nov 29, 2012Updated 13 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Phase-field snow microstructure☆19Jan 10, 2023Updated 3 years ago
- keynote☆15Sep 2, 2013Updated 13 years ago
- Geom R-CNN☆19Jun 20, 2018Updated 8 years ago
- Implementation of "GANs for Biological Image Synthesis"☆96Nov 27, 2017Updated 8 years ago
- Development version of vioplot R package (CRAN maintainer)☆29Feb 23, 2025Updated last year
- 코로나-19 에 대한 확진/완치/사망 에 대한 국내, 해외 정보를 수집합니다. Data scrapes Covid-19 Confirmed/Cured/Deceases Cases.☆10Jun 6, 2021Updated 5 years ago
- the solustion to https://openai.com/requests-for-research☆12Mar 23, 2017Updated 9 years ago