Streamlit web application to deploy a machine learning binary classifier to predict the activity of antimicrobial peptides
☆10Dec 13, 2022Updated 3 years ago
Alternatives and similar repositories for AMPredST
Users that are interested in AMPredST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AMPDeep: Hemolytic Activity Prediction of Antimicrobial Peptides using Transfer Learning☆13Aug 15, 2022Updated 3 years ago
- Code for paper 'Accelerating Antimicrobial Peptide Discovery with Latent Sequence-Structure Model'☆13Mar 21, 2024Updated 2 years ago
- The GAN model for designing AMP☆17Aug 19, 2025Updated 7 months ago
- ☆18Oct 16, 2025Updated 5 months ago
- antimicrobial peptide prediction in R☆33Dec 17, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification o…☆14May 10, 2025Updated 10 months ago
- A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized…☆17Sep 10, 2024Updated last year
- This repository provides an implementation of the DTi2Vec tool, to identify Drug-Target interaction using network embedding and ensemble …☆12Sep 28, 2021Updated 4 years ago
- Supporting code for the paper «Leveraging molecular structure and bioactivity with chemical language models for drug design»☆12Feb 22, 2022Updated 4 years ago
- My progress log and projects I have worked on during the 100DaysOfMLCode challenge☆13Jun 15, 2022Updated 3 years ago
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fi…☆14Nov 24, 2020Updated 5 years ago
- Designing antimicrobial peptides (AMPs) is awesome.☆27Mar 21, 2026Updated last week
- A PyTorch implementation of "Automatic Identification and Virtual Directed Evolution of Antimicrobial Peptides with Explainable Deep Lear…☆41Aug 1, 2025Updated 7 months ago
- FingerPrint Kit - Python-based cheminformatics package for fingerprint-related tasks☆12Jun 4, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The implementation of the paper sAMPpred-GAT: Prediction of Antimicrobial Peptide by Graph Attention Network and Predicted Peptide Struct…☆35Oct 1, 2022Updated 3 years ago
- molecule design for fluorescence☆12Nov 22, 2021Updated 4 years ago
- Bi-Encoder approach for large-scale protein-peptide binding search☆13Jun 14, 2024Updated last year
- A molecular docking pipeline for the drug database against SARS-CoV2☆14Jan 20, 2021Updated 5 years ago
- Generator and regressor neural networks for antimicrobial peptides☆25Jan 30, 2024Updated 2 years ago
- This repository was built using the same code from tunapanda. I've made modifications to help others download this code and add it to the…☆10Mar 1, 2021Updated 5 years ago
- VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupy…☆38Feb 10, 2026Updated last month
- docking visualization with py3dmol and streamlit☆25Mar 15, 2021Updated 5 years ago
- Taller de introducción al biocómputo en sistemas UNIX y GNU/Linux☆22Nov 2, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- DeepCDA☆15Mar 19, 2020Updated 6 years ago
- ☆17Feb 8, 2024Updated 2 years ago
- Tailoring Molecules for Protein Pockets: a Transformer-based Generative Solution for Structured-based Drug Design☆20Jul 26, 2023Updated 2 years ago
- Implementation of the paper "Neuraldecipher - Reverse-engineering extended-connectivity fingerprints (ECFPs) to their molecular structure…☆26Oct 1, 2020Updated 5 years ago
- Lars's datasets☆12Jun 16, 2024Updated last year
- Tree-Invent: A novel molecular generative model constrained with topological tree☆13Jul 26, 2023Updated 2 years ago
- Tautomer ratios in solution☆28Sep 20, 2021Updated 4 years ago
- Intelligent Document Processing with AWS AI/ML, published by Packt☆12Mar 2, 2026Updated 3 weeks ago
- OMARG-AIR/AID (Our Models and Applications Repository for General Artificial Intelligence Research and AI Development) - A hub for curate…☆14Feb 26, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆12Mar 22, 2023Updated 3 years ago
- ☆11Nov 11, 2024Updated last year
- Drug discovery project by making use of the Tox-21 dataset.☆22Apr 27, 2023Updated 2 years ago
- A layout to switch over its children using a page folding animation☆31Apr 20, 2016Updated 9 years ago
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆35Mar 19, 2021Updated 5 years ago
- Simple script to re-rank images using OpenAI's CLIP https://github.com/openai/CLIP.☆15May 3, 2021Updated 4 years ago
- ☆13Mar 24, 2024Updated 2 years ago