Computational workflows to assess phototoxicity in live-cell microscopy experiments
☆11Sep 15, 2025Updated 6 months ago
Alternatives and similar repositories for PhotoFiTT
Users that are interested in PhotoFiTT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Musical for ImageJ☆11Jul 18, 2023Updated 2 years ago
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- Recipes for open microscopy☆12Dec 7, 2020Updated 5 years ago
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Feb 22, 2022Updated 4 years ago
- Visual interpretability of image-based classification models by generative latent space disentanglement☆13Jun 16, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Jun 6, 2023Updated 2 years ago
- A simple single molecule tracking pipeline with a graphic user interface for quality control.☆13Jan 25, 2024Updated 2 years ago
- napari widgets for start-to-finish batch processing☆15Apr 1, 2026Updated last week
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆90Mar 3, 2026Updated last month
- Denoising Via Self Supervised Transfer Learning☆13Feb 16, 2021Updated 5 years ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆13Oct 13, 2025Updated 5 months ago
- ☆13Apr 27, 2020Updated 5 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Resources for teaching/preparing to teach bioimage analysis☆58Mar 25, 2026Updated 2 weeks ago
- ☆13Updated this week
- Denoising via adaptive binning.☆13Jan 6, 2026Updated 3 months ago
- A napari plugin to analysis point spread functions.☆12Mar 28, 2025Updated last year
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆86Mar 28, 2026Updated last week
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated 2 months ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Jan 24, 2022Updated 4 years ago
- litemind is a Python library designed to empower developers to build sophisticated conversational agents and tools. It provides a flexibl…☆18Updated this week
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆60Jun 30, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆18Oct 12, 2019Updated 6 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- ImageJ plugins to run ilastik workflows☆27Mar 9, 2026Updated last month
- ☆52May 1, 2025Updated 11 months ago
- Single Molecule Imaging Toolbox Extraordinaire☆18Dec 19, 2025Updated 3 months ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- ☆11Mar 24, 2023Updated 3 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Sep 11, 2021Updated 4 years ago
- Program and links to the material for the GloBIAS Training School 2025, Kobe, Japan.☆22Oct 27, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Imagej toolset to ease hyperstacks visualization and handling☆23Feb 9, 2026Updated 2 months ago
- ☆46Mar 28, 2024Updated 2 years ago
- widget for PSF simulation with aberrations☆25Oct 31, 2023Updated 2 years ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Mar 26, 2026Updated 2 weeks ago
- N-dimensional, multiresolution file format for Micro-Manager☆14Mar 13, 2026Updated 3 weeks ago
- Web-based interactive lens design tool.☆12Dec 17, 2022Updated 3 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year