zaritskylab / DISCOVERLinks
Visual interpretability of image-based classification models by generative latent space disentanglement
☆12Updated 4 months ago
Alternatives and similar repositories for DISCOVER
Users that are interested in DISCOVER are comparing it to the libraries listed below
Sorting:
- Easy Volumetric Segmentation with Deep Learning☆28Updated 2 weeks ago
- ☆92Updated 4 months ago
- Codebase for "A Foundation Model for Cell Segmentation"☆110Updated 3 weeks ago
- Stain normalization tools for histological analysis and computational pathology☆156Updated 9 months ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆109Updated last week
- Segment Anything for Microscopy☆605Updated last month
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆36Updated 8 months ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆105Updated last week
- ☆15Updated last month
- PAthological QUpath Obsession - QuPath and Python conversations☆122Updated 2 months ago
- QuPath extension for Segment Anything Model (SAM)☆122Updated 3 months ago
- ☆100Updated 3 weeks ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆25Updated 2 years ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 3 years ago
- MESCnn: MESC classification by neural network☆10Updated last year
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated last week
- ☆188Updated last week
- Open source Python library for building bioimage analysis pipelines☆185Updated this week
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆331Updated 3 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆38Updated last year
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆477Updated last week
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last week
- 3D shape analysis using deep learning☆28Updated 3 weeks ago
- Toolkit to help develop and run QuPath scripts from Eclipse and other IDEs, including over remote connections. (See README.md for more in…☆17Updated 5 years ago
- ☆201Updated 2 years ago
- Segment Anything for Medical Imaging☆26Updated last week
- ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy☆619Updated last week
- Utilities for building and using the CEM dataset for unsupervised pre-training and downstream tasks.☆29Updated 2 years ago