zaritskylab / DISCOVERLinks
Visual interpretability of image-based classification models by generative latent space disentanglement
☆12Updated 3 months ago
Alternatives and similar repositories for DISCOVER
Users that are interested in DISCOVER are comparing it to the libraries listed below
Sorting:
- Codebase for "A Foundation Model for Cell Segmentation"☆110Updated last week
- Segment Anything for Microscopy☆594Updated 2 weeks ago
- Easy Volumetric Segmentation with Deep Learning☆27Updated 3 weeks ago
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆323Updated 2 months ago
- Stain normalization tools for histological analysis and computational pathology☆153Updated 8 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆36Updated 8 months ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆470Updated last week
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated last month
- MESCnn: MESC classification by neural network☆10Updated last year
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆107Updated this week
- ☆91Updated 4 months ago
- QuPath extension for Segment Anything Model (SAM)☆121Updated 2 months ago
- ☆186Updated last week
- PAthological QUpath Obsession - QuPath and Python conversations☆122Updated last month
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆158Updated last year
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆24Updated 2 years ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 3 years ago
- Ressources of histopathology datasets☆470Updated 3 months ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆232Updated 7 months ago
- Virtual Alignment of pathoLogy Image Series☆178Updated 3 months ago
- ☆199Updated 2 years ago
- Interpretable Gland-Graph Networks☆22Updated last year
- ☆98Updated this week
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated this week
- NuSeT: A Deep Learning Tool for Reliably Separating and Analyzing Crowded Cells☆20Updated 5 years ago
- Powerful, open-source AI tools for digital pathology.☆330Updated 2 weeks ago
- ☆240Updated last year
- Segment Anything for Histopathology☆47Updated last month
- Python code to read/write .annotation files from Halo☆10Updated 7 months ago