GenomicsCoreLeuven / GBSX
GBSX: a toolkit for experimental design and demultiplexing genotyping by sequencing experiments
☆18Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for GBSX
- A program to call variants from genome alignment☆76Updated 7 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Synteny Imager☆60Updated 2 months ago
- ☆42Updated 7 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆50Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆67Updated 3 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆43Updated 2 months ago
- Tutorial about R package PopGenome☆40Updated 5 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆64Updated 6 years ago
- A pipeline that accepts a VCF file to run through Admixture☆56Updated 2 months ago
- A (very) simple script to QC Hi-C data.☆25Updated last year
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated last year
- web documentation for Trinotate☆48Updated last year
- Pinpoints the mutation favored by selection☆32Updated 3 years ago
- finshingTool☆54Updated 7 years ago
- ☆24Updated 2 years ago
- Genome Annotation Without Nightmares☆43Updated last year
- ☆69Updated last month
- A set of functions to visualise genotypes based on a VCF☆84Updated 2 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆77Updated 3 years ago
- TGS scaffolding☆45Updated 2 years ago
- Calculate GC% and GC deviation for circular genomes☆17Updated 4 years ago
- Automated de novo assembly of whole chloroplast genomes.☆44Updated last month
- ☆24Updated 7 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆37Updated 4 years ago
- Conditional Reciprocal Best Blast☆40Updated 7 years ago
- Transcripts annotation and GO enrichment Fisher tests☆25Updated last year
- A shiny application to visualize MCscan result☆33Updated 2 years ago
- info and docs for the Wright Lab☆14Updated 8 years ago