DataBiosphere / leonardoLinks
Notebook service
☆44Updated last week
Alternatives and similar repositories for leonardo
Users that are interested in leonardo are comparing it to the libraries listed below
Sorting:
- A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs☆69Updated 3 years ago
- Bioinformatics for the Scala programming language☆112Updated last year
- Rawls service for DSDE☆25Updated this week
- ☆31Updated last week
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated 5 months ago
- workbench identity and access management☆41Updated last week
- Efficient, distributed downloads of large files from S3 to HDFS using Spark.☆17Updated 8 years ago
- Load genomic BAM files using Apache Spark☆21Updated 7 years ago
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- machine learning for genomic variants☆146Updated 9 months ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 8 years ago
- Client for the Cromwell workflow engine☆17Updated last year
- ☆15Updated 4 months ago
- An open-source toolkit for large-scale genomic analysis☆286Updated 3 weeks ago
- Python graph database framework for bioinformatics☆93Updated 3 years ago
- FireCloud user interface for web browsers.☆19Updated 2 months ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆71Updated 2 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 5 years ago
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆95Updated last week
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated 5 months ago
- ☆21Updated 6 years ago
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- Benchmarking toolkit for variant calling☆47Updated 4 years ago
- Quality control methods for human genomic variants.☆62Updated 2 years ago
- An example of bioinformatics and bigdata tools can playing nicely together☆14Updated 9 years ago
- An argument parsing library for Scala☆11Updated last month
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆23Updated 9 years ago
- Integrate the GA4GH schemas and probably a scala impl of the service.☆14Updated 9 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 5 months ago