DataBiosphere / leonardoLinks
Notebook service
☆44Updated 3 weeks ago
Alternatives and similar repositories for leonardo
Users that are interested in leonardo are comparing it to the libraries listed below
Sorting:
- Rawls service for DSDE☆26Updated last week
- A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs☆69Updated 3 years ago
- ☆31Updated last week
- workbench identity and access management☆43Updated this week
- Bioinformatics for the Scala programming language☆114Updated 4 months ago
- Load genomic BAM files using Apache Spark☆21Updated 7 years ago
- Efficient, distributed downloads of large files from S3 to HDFS using Spark.☆17Updated 8 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆41Updated 10 months ago
- A scalable genome browser. Apache 2 licensed.☆126Updated 3 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- machine learning for genomic variants☆147Updated last month
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 9 years ago
- Client for the Cromwell workflow engine☆17Updated last year
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆72Updated 3 years ago
- ☆15Updated 9 months ago
- WDL tools for parsing, type-checking, and more☆27Updated 4 months ago
- FireCloud user interface for web browsers.☆19Updated 4 months ago
- ☆93Updated last month
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Updated 7 years ago
- MaRe leverages the power of Docker and Spark to run and scale your serial tools in MapReduce fashion.☆14Updated 3 years ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 5 years ago
- Quality control methods for human genomic variants.☆62Updated 3 years ago
- Web user interface for the Terra platform☆54Updated this week
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆32Updated 3 weeks ago
- Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices☆11Updated 5 years ago
- Efficient variant-call data storage and retrieval library using the TileDB storage library.☆99Updated 3 weeks ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated 3 years ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆27Updated 5 months ago