The R package for SVM with GPU architecture based on the GTSVM software
☆32Aug 4, 2021Updated 4 years ago
Alternatives and similar repositories for Rgtsvm
Users that are interested in Rgtsvm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 4 months ago
- Code and data from Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020)☆15Nov 5, 2020Updated 5 years ago
- R interface to query UCSC bigWig files☆14Aug 23, 2020Updated 5 years ago
- Ultra-fast 5' and 3' demultiplexer☆29Apr 23, 2024Updated last year
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Dec 12, 2018Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Locus Overlap Analysis: Enrichment of Genomic Ranges☆80Sep 1, 2020Updated 5 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 3 years ago
- ☆15Jul 7, 2023Updated 2 years ago
- Bioinformatic tools (R scripts) for the analysis of Absolute Quantification of Architecture (AQuA-HiChIP) style data.☆12Sep 12, 2025Updated 7 months ago
- CReSIL: Accurate Identification of Extrachromosomal Circular DNA from Long-read Sequences☆12Aug 21, 2025Updated 7 months ago
- ☆29Feb 17, 2021Updated 5 years ago
- Mutation Spectra Analysis☆10Mar 15, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Starting from the 'r.vw' R interface to Vowpal Wabbit☆13Aug 22, 2018Updated 7 years ago
- ☆11Dec 12, 2024Updated last year
- Tool used to quantify extrachromosomal DNA (ecDNA) in metaphase images stained with DAPI and FISH probes.☆17Mar 3, 2026Updated last month
- Create cwl workflows by writing a simple Python script☆40Apr 29, 2020Updated 5 years ago
- Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation☆81Jan 24, 2025Updated last year
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 7 years ago
- Mapping Alternative Splicing Events to pRoteins☆21Feb 8, 2022Updated 4 years ago
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Jul 25, 2022Updated 3 years ago
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆37Jan 28, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Mar 4, 2019Updated 7 years ago
- 🌸 Train floret vectors☆18May 4, 2023Updated 2 years ago
- A deep convolutional neural network for the accurate prediction of silencers☆16May 23, 2023Updated 2 years ago
- Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome☆22Jun 10, 2022Updated 3 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Mar 4, 2019Updated 7 years ago
- Pynocular is a lightweight ORM that lets you query your database using Pydantic models and asyncio☆12May 24, 2022Updated 3 years ago
- An R package that implements fast searching for multiple keywords in multiple texts.☆11Feb 5, 2025Updated last year
- Absolute Copy Number Estimation using low-coverage whole genome sequencing data☆20Oct 17, 2025Updated 6 months ago
- Particle dynamics and simulated annealing for chromosome structure calculation☆30Mar 15, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Data from the Sequoia treebank.☆11Apr 7, 2026Updated last week
- Variant caller GUI + genetic disease analysis☆22Apr 29, 2020Updated 5 years ago
- official build specifications for jupyter☆13Jun 3, 2021Updated 4 years ago
- Experimental Marimo extension for Agentic Notebooks -- integrating AI Agents into the Notebook workflow☆14Oct 11, 2025Updated 6 months ago
- a tool to detect eccDNA using Illumina and ONT sequencing☆15Apr 20, 2024Updated 2 years ago
- Keep Me Around: Intron Retention Detection☆31Jan 30, 2019Updated 7 years ago
- Named Entity Recognition with the Nametag Maximum Entropy Markov model☆12Feb 9, 2026Updated 2 months ago