πBioinformatics Technology Lab common code library
β29Apr 30, 2026Updated last month
Alternatives and similar repositories for btllib
Users that are interested in btllib are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Finding putative exons and constructing splicegraphs using Trans-ABySS contigsβ11Nov 8, 2018Updated 7 years ago
- βοΈ Genome assembly polishing & SNV detectionβ73Updated this week
- ntHash implementation in Rustβ36Jul 12, 2024Updated last year
- The BTL C/C++ Common bloom filters for bioinformatics projects, as well as any APIs created for other programming languages.β18Feb 26, 2022Updated 4 years ago
- Linear-time de novo Long Read Assemblerβ41Mar 19, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Create Bloom filters for a given reference and then use it to categorize sequencesβ78Nov 26, 2024Updated last year
- Identifying repeats in high-throughput sequencing dataβ16Apr 12, 2024Updated 2 years ago
- genotyping by Mapping-free ALternate-allele detection of known VAriantsβ10Mar 6, 2023Updated 3 years ago
- Iterate k-min-mers from a DNA sequence in Rustβ13Apr 8, 2024Updated 2 years ago
- Implementation of a Backpack Quotient Filterβ13May 6, 2026Updated last month
- Go implementation of ntHashβ20Sep 16, 2021Updated 4 years ago
- interactive visualization of single-cell transcriptomesβ11Mar 10, 2026Updated 2 months ago
- 𧬠Unique (& conserved) DNA sequence identificationβ19Updated this week
- DartMinHash: Fast Sketching for Weighted Setsβ12Dec 8, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- modular k-mer count matrix and Bloom filter construction for large read collectionsβ88Mar 24, 2026Updated 2 months ago
- Python tool for the analysis and visualization of mobile genetic elementsβ20May 26, 2025Updated last year
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.β13Nov 1, 2022Updated 3 years ago
- A plant organellar Graphical Fragment Assembly toolkitβ16Sep 10, 2025Updated 8 months ago
- your friendly pangenome graph genotyperβ10Feb 6, 2023Updated 3 years ago
- Deep learning embedding for nucleotide sequencesβ20Mar 12, 2026Updated 2 months ago
- reference-free transcriptome assembly for short and long readsβ109Mar 13, 2026Updated 2 months ago
- This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye Rβ¦β18May 21, 2017Updated 9 years ago
- Attentive deep learning model for antimicrobial peptide predictionβ63Jun 2, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fast hash function for DNA/RNA sequencesβ107Apr 2, 2026Updated 2 months ago
- A Python wrapper for the bbhash library for Minimal Perfect Hashingβ19Oct 26, 2025Updated 7 months ago
- Post Assembly Variants Finderβ18Mar 24, 2026Updated 2 months ago
- β13Aug 13, 2024Updated last year
- SNP and indel calls from multiple sequence alignment (MSA)β13Nov 11, 2022Updated 3 years ago
- RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketchesβ54May 10, 2026Updated 3 weeks ago
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardizationβ24Mar 26, 2026Updated 2 months ago
- A Rust library for building modular, fast and compact indexes over genomic dataβ12Nov 22, 2023Updated 2 years ago
- Drosophila transposable element canonical sequencesβ30Jul 11, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fit LOg-RAtio Lasso regression for compositional covariatesβ16Feb 8, 2026Updated 4 months ago
- β Long Interval Nucleotide K-mer Scaffolderβ73Mar 27, 2026Updated 2 months ago
- Iterate over minimizers of a DNA sequenceβ32Jul 12, 2024Updated last year
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina dataβ14Jul 21, 2019Updated 6 years ago
- β19Apr 14, 2024Updated 2 years ago
- A dotplot application for DNA/RNA sequenceβ11Nov 28, 2022Updated 3 years ago
- Aligns short reads using dynamic seed size with strobemersβ198Updated this week