πBioinformatics Technology Lab common code library
β29Mar 30, 2026Updated last week
Alternatives and similar repositories for btllib
Users that are interested in btllib are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Finding putative exons and constructing splicegraphs using Trans-ABySS contigsβ11Nov 8, 2018Updated 7 years ago
- βοΈ Genome assembly polishing & SNV detectionβ73Apr 1, 2026Updated last week
- ntHash implementation in Rustβ36Jul 12, 2024Updated last year
- The BTL C/C++ Common bloom filters for bioinformatics projects, as well as any APIs created for other programming languages.β18Feb 26, 2022Updated 4 years ago
- Linear-time de novo Long Read Assemblerβ41Mar 19, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off β’ AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Create Bloom filters for a given reference and then use it to categorize sequencesβ77Nov 26, 2024Updated last year
- Identifying repeats in high-throughput sequencing dataβ16Apr 12, 2024Updated last year
- genotyping by Mapping-free ALternate-allele detection of known VAriantsβ10Mar 6, 2023Updated 3 years ago
- Iterate k-min-mers from a DNA sequence in Rustβ13Apr 8, 2024Updated 2 years ago
- Implementation of a Backpack Quotient Filterβ13Jul 7, 2025Updated 9 months ago
- Go implementation of ntHashβ20Sep 16, 2021Updated 4 years ago
- interactive visualization of single-cell transcriptomesβ11Mar 10, 2026Updated 3 weeks ago
- 𧬠Unique (& conserved) DNA sequence identificationβ17Mar 10, 2026Updated 3 weeks ago
- DartMinHash: Fast Sketching for Weighted Setsβ12Dec 8, 2025Updated 4 months ago
- NordVPN Special Discount Offer β’ AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- modular k-mer count matrix and Bloom filter construction for large read collectionsβ87Mar 24, 2026Updated 2 weeks ago
- Python tool for the analysis and visualization of mobile genetic elementsβ20May 26, 2025Updated 10 months ago
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.β13Nov 1, 2022Updated 3 years ago
- A plant organellar Graphical Fragment Assembly toolkitβ16Sep 10, 2025Updated 6 months ago
- your friendly pangenome graph genotyperβ10Feb 6, 2023Updated 3 years ago
- Deep learning embedding for nucleotide sequencesβ20Mar 12, 2026Updated 3 weeks ago
- reference-free transcriptome assembly for short and long readsβ108Mar 13, 2026Updated 3 weeks ago
- This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye Rβ¦β18May 21, 2017Updated 8 years ago
- Attentive deep learning model for antimicrobial peptide predictionβ57Mar 17, 2026Updated 3 weeks ago
- DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Fast hash function for DNA/RNA sequencesβ106Apr 2, 2026Updated last week
- A Python wrapper for the bbhash library for Minimal Perfect Hashingβ19Oct 26, 2025Updated 5 months ago
- Post Assembly Variants Finderβ18Mar 24, 2026Updated 2 weeks ago
- β13Aug 13, 2024Updated last year
- SNP and indel calls from multiple sequence alignment (MSA)β13Nov 11, 2022Updated 3 years ago
- RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketchesβ53Mar 30, 2026Updated last week
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardizationβ24Mar 26, 2026Updated 2 weeks ago
- A Rust library for building modular, fast and compact indexes over genomic dataβ12Nov 22, 2023Updated 2 years ago
- Drosophila transposable element canonical sequencesβ30Jul 11, 2022Updated 3 years ago
- DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Fit LOg-RAtio Lasso regression for compositional covariatesβ15Feb 8, 2026Updated 2 months ago
- β Long Interval Nucleotide K-mer Scaffolderβ73Mar 27, 2026Updated last week
- Iterate over minimizers of a DNA sequenceβ32Jul 12, 2024Updated last year
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina dataβ14Jul 21, 2019Updated 6 years ago
- β19Apr 14, 2024Updated last year
- A dotplot application for DNA/RNA sequenceβ11Nov 28, 2022Updated 3 years ago
- Aligns short reads using dynamic seed size with strobemersβ194Apr 1, 2026Updated last week