avsastry / modulome-workflowLinks
Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA
☆17Updated last year
Alternatives and similar repositories for modulome-workflow
Users that are interested in modulome-workflow are comparing it to the libraries listed below
Sorting:
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- This project proposes to contribute to fill the knowledge gap about Covid-19SARS-CoV-2 in Brazil and with the global knowledge about the …☆14Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆89Updated 5 months ago
- Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA☆17Updated 8 months ago
- UniProt Id Mapping through API☆34Updated 9 months ago
- Fast and flexible ORF finder☆73Updated 3 years ago
- ☆66Updated 4 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- RNA secondary structure/sequence profiles for homology search and alignment☆112Updated 8 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated 2 weeks ago
- A Pure-Python parser of HMMER3 output☆17Updated 9 months ago
- Deep learning embedding for nucleotide sequences☆19Updated 3 months ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆20Updated last week
- The tRNA adaptation index☆18Updated 2 months ago
- software for the analysis and visualization of deep mutational scanning data☆35Updated 2 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆37Updated last month
- ☆26Updated 10 months ago
- Associated code for EvoWeaver publication☆15Updated last month
- Python port of the R Bioconductor `seqLogo` package☆33Updated 11 months ago
- ☆25Updated last year
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆32Updated 2 years ago
- Models, design algorithms, and other software related to Salis lab publications☆34Updated 8 months ago
- Logan Unitigs and Contigs☆137Updated this week
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- ☆11Updated 2 years ago
- A transmembrane helix finder in Python 3.☆39Updated last year
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆9Updated last year
- Comprehensive Python client for the Uniprot REST API☆50Updated last month
- sensitive and precise assembly of short sequencing reads☆157Updated 9 months ago