Alternatives and similar repositories for pride-inspector

Users that are interested in pride-inspector are comparing it to the libraries listed below

• CompOmics / peptide-shaker
  Interpretation of proteomics identification results
  ☆52Updated this week
• msdk / msdk
  MSDK source code repository
  ☆40Updated 3 years ago
• CompOmics / moFF
  A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
  ☆33Updated 4 years ago
• RASpicer / MetabolomicsTools
  ☆55Updated 4 years ago
• chhh / batmass
  Mass spectrometry data visualization
  ☆37Updated 4 years ago
• fgcz / rawrr
  Access Orbitrap data in R lang using C# .NET assembly - bioconductor package
  ☆58Updated 2 months ago
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆53Updated 4 years ago
• CompOmics / compomics-utilities
  Open source Java library for computational proteomics
  ☆34Updated 3 months ago
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆12Updated 4 years ago
• ursgal / ursgal
  Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
  ☆42Updated last week
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆26Updated 2 months ago
• oloBion / Retip
  Retip - Retention Time prediction for metabolomics
  ☆32Updated last year
• MolecularCartography / Optimus
  Workflow for LC-MS feature analysis and spatial mapping
  ☆20Updated 7 years ago
• sirius-ms / sirius-libs
  sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java
  ☆54Updated last year
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated last year
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆30Updated 2 years ago
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆66Updated 2 years ago
• mzmine / mzmine2
  MZmine 2 source code repository
  ☆134Updated last year
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆30Updated last year
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆98Updated 2 months ago
• metabolomics-cloud / mummichog
  pathway and network analysis for metabolomics
  ☆43Updated last year
• dosorio / Peptides
  An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
  ☆93Updated last year
• HUPO-PSI / mzTab
  mzTab Reporting MS-based Proteomics and Metabolomics Results
  ☆43Updated 7 months ago
• IFIproteomics / LFQbench
  ☆24Updated 2 years ago
• PNNL-Comp-Mass-Spec / Informed-Proteomics
  Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
  ☆31Updated 3 years ago
• Nesvilab / philosopher
  PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering
  ☆120Updated last week
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated 2 years ago
• medbioinf / pia
  PIA - Protein Inference Algorithms
  ☆24Updated 2 weeks ago
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆69Updated 4 years ago
• Nesvilab / DIA-Umpire
  Computational analysis for mass spectrometry-based proteomics data
  ☆20Updated 6 months ago