saezlab / lipyd
Python module for lipidomics LC MS/MS data analysis
☆15Updated 7 months ago
Alternatives and similar repositories for lipyd:
Users that are interested in lipyd are comparing it to the libraries listed below
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆22Updated last year
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆30Updated 9 months ago
- ☆56Updated 8 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated last month
- Community-curated tutorials and datasets for ML in proteomics☆49Updated 2 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆26Updated last week
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆20Updated last week
- A package to cluster and visualise MS/MS spectral data☆11Updated 3 years ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆19Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆34Updated last week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆46Updated this week
- Reporting and exchange format for mass spectrometry quality control data☆28Updated 2 weeks ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆23Updated last year
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 2 years ago
- Imputing proteomics data using deep learning models☆20Updated this week
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆79Updated 3 weeks ago
- A Python interface to proteomics data repositories☆32Updated 9 months ago
- R package for optimized LC-MS spectra processing☆23Updated 2 months ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆27Updated 6 months ago
- A collection of available Python tools for Proteomics analysis☆52Updated 5 years ago
- RawQuant is a Python package for extracting scan meta data and quantification values from Thermo .raw files.☆10Updated 6 years ago
- An open-source Python package to unify raw MS data accession and storage.☆18Updated last week
- Python Package for the downstream analysis of mass-spectrometry-based proteomics data☆64Updated this week
- Realtime quality control for mass spectrometry data acquisition☆15Updated 3 months ago
- ☆35Updated this week
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆32Updated 3 years ago
- ☆25Updated last year
- A community dedicated to education of computer coding applied to mass spectrometry applications.☆49Updated last year
- Spectral library searching using approximate nearest neighbor techniques.☆42Updated 6 months ago
- ☆14Updated 2 years ago