AIRI-Institute / SEMAiView external linksLinks
Spatial Epitope Modeling with Artificial intelligence (SEMA)
☆46Apr 1, 2024Updated last year
Alternatives and similar repositories for SEMAi
Users that are interested in SEMAi are comparing it to the libraries listed below
Sorting:
- GENA-LM is a transformer masked language model trained on human DNA sequence.☆222Updated this week
- ☆35Sep 21, 2023Updated 2 years ago
- The Hierarchical Intrinsically Motivated Agent (HIMA) is an algorithm that is intended to exhibit an adaptive goal-directed behavior usin…☆37Oct 7, 2025Updated 4 months ago
- [ICLR-2025] POGEMA stands for Partially-Observable Grid Environment for Multiple Agents. This is a grid-based environment that was specif…☆265Jan 28, 2026Updated 2 weeks ago
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆12Feb 6, 2026Updated last week
- This repository contains a deep learning-based approach for improving A* search efficiency on grid graphs. By learning instance-dependent…☆23Aug 27, 2024Updated last year
- Code for the DiscoTope-3.0 paper and model☆14Oct 18, 2025Updated 3 months ago
- AIMS - Automated Immune Molecule Separator: An analysis pipeline for distinguishing distinct subsets of Ig and MHC molecules. See below s…☆10Jul 25, 2025Updated 6 months ago
- Active learning☆79Feb 8, 2023Updated 3 years ago
- Antibody-Specific Epitope Mapping☆16Sep 10, 2025Updated 5 months ago
- Polyreactivity Website☆21Jun 26, 2023Updated 2 years ago
- Introduction to cyclic peptide simulations and our group's protocols.☆15Sep 21, 2023Updated 2 years ago
- Framework for probing tasks☆30Mar 24, 2024Updated last year
- ☆16Sep 4, 2024Updated last year
- EvolveX, a de novo antibody computational design pipeline.☆22Sep 18, 2025Updated 4 months ago
- ☆15Dec 19, 2025Updated last month
- Paratope Prediction using Deep Learning☆61May 24, 2023Updated 2 years ago
- De novo design of small molecule binding sites into proteins☆12Apr 14, 2021Updated 4 years ago
- ☆37Aug 28, 2023Updated 2 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆353Jun 29, 2023Updated 2 years ago
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆16Aug 3, 2021Updated 4 years ago
- ☆18Mar 13, 2024Updated last year
- Generative Language Modeling for Antibody Design☆180Oct 5, 2024Updated last year
- ☆16Sep 5, 2024Updated last year
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆225May 13, 2025Updated 9 months ago
- AlphaBind code + model accompanying pre-print☆89Jul 24, 2025Updated 6 months ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆168Nov 30, 2022Updated 3 years ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆102Jan 9, 2026Updated last month
- ☆21Feb 6, 2026Updated last week
- Collection of papers related to BCR repertoire analyses☆19Jan 21, 2022Updated 4 years ago
- HLA-I ligand predictor☆43Sep 24, 2025Updated 4 months ago
- BERT-based model for Russian language biomedical text mining☆23Dec 13, 2022Updated 3 years ago
- ☆21Oct 31, 2024Updated last year
- ☆26Aug 21, 2024Updated last year
- ☆159Sep 10, 2024Updated last year
- ☆28Aug 26, 2025Updated 5 months ago
- Protein hallucination and inpainting with RoseTTAFold☆279Mar 30, 2023Updated 2 years ago
- ☆22Aug 30, 2022Updated 3 years ago
- Pipeline for protein-protein interaction prediction☆27Feb 22, 2022Updated 3 years ago