AIRI-Institute / SEMAiLinks
Spatial Epitope Modeling with Artificial intelligence (SEMA)
☆42Updated last year
Alternatives and similar repositories for SEMAi
Users that are interested in SEMAi are comparing it to the libraries listed below
Sorting:
- ☆32Updated last year
- Directed evolution of proteins in sequence space with gradients☆87Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆116Updated 4 months ago
- PLM based active learning model for protein engineering☆82Updated last year
- Protein Design by Machine Learning guided Directed Evolution☆44Updated 4 months ago
- Improved antibody structure-based design using inverse folding☆128Updated 3 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆55Updated last month
- Sandbox for Deep-Learning based Computational Protein Design☆112Updated last month
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆82Updated last month
- Aligning protein generative models with experimental fitness☆102Updated 2 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆145Updated last week
- ☆43Updated 7 months ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆78Updated 2 months ago
- ☆74Updated last year
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆117Updated last year
- Official repository of EnzymeFlow☆92Updated 8 months ago
- AlphaFold-initiated replica exchange protein docking☆83Updated 2 months ago
- Peptide optimization with Machine Learning☆76Updated 2 years ago
- ☆77Updated 3 weeks ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆40Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆95Updated 3 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆63Updated 8 months ago
- RXN for biochemical reactions☆69Updated 2 years ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆140Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆79Updated last year
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆60Updated 5 months ago
- Template-based protein design with Raygun☆71Updated this week
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆102Updated 10 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- Protein design and variant prediction using autoregressive generative models☆108Updated last year