GEFormer is a genome-wide prediction model for genotype-environment interactions based on a deep learning approach designed to predict maize phenotypes using genotype and environment jointly.
☆16Jan 15, 2026Updated 6 months ago
Alternatives and similar repositories for GEFormer
Users that are interested in GEFormer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆30Jun 14, 2025Updated last year
- Automated Machine Learning for Environmental Data-Driven Genome Prediction☆16Sep 12, 2025Updated 10 months ago
- A website to predict phenotypes of soybean by uploading .vcf files.☆18Mar 13, 2024Updated 2 years ago
- Repository for code used for publications☆30Apr 23, 2026Updated 3 months ago
- GWAS analysis process based on EMMAX software☆21Dec 12, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is a read-only mirror of the CRAN R package repository. rrBLUP — Ridge Regression and Other Kernels for Genomic Selection. Homepag…☆14Dec 11, 2023Updated 2 years ago
- 云南师范大学校园网认证☆10Oct 27, 2024Updated last year
- TrGP aims to get knowledge from the source task's learning system to improve the target genomic prediction (GP) task.☆14Dec 12, 2023Updated 2 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆11Jun 26, 2026Updated last month
- Genomic Annotation in Livestock for positional candidate LOci☆14Feb 26, 2021Updated 5 years ago
- A deeplearning driving bioinformatic toolkit.☆25Jul 14, 2025Updated last year
- This is a named entity recognition (NER) dataset for OSINT towards the national defense domain.☆10Apr 21, 2023Updated 3 years ago
- Code for fuzzy monkeys.☆15Jul 10, 2026Updated last month
- ☆11Aug 20, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Oct 15, 2024Updated last year
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago
- Dual-extraction method for phenotypic prediction and functional gene mining of complex traits☆14Oct 30, 2024Updated last year
- Plant breeding simulations with AlphaSimR☆30Jan 5, 2025Updated last year
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated 2 years ago
- GPU accelerated GWAS framework based on TensorFlow☆33Jul 6, 2023Updated 3 years ago
- ☆27Jul 28, 2025Updated last year
- ☆21Dec 13, 2024Updated last year
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Genome haplotype assembly and assessment method☆12Nov 24, 2023Updated 2 years ago
- Shiu Lab code base for Machine Learning implemented in SciKit-Learn☆13Oct 5, 2021Updated 4 years ago
- Chromax is a breeding simulator based on JAX.☆10Jun 6, 2025Updated last year
- ArchaicSeeker is a series of software for detecting archaic introgression sequences and reconstructing introgression history. The latest …☆20Aug 6, 2025Updated last year
- ☆15Jul 16, 2026Updated 3 weeks ago
- Perl scripts for working with the GFF format☆16Aug 24, 2011Updated 14 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Feb 11, 2019Updated 7 years ago
- ☆116Jul 16, 2026Updated 3 weeks ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆12May 8, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Mar 31, 2021Updated 5 years ago
- A simple script to calculate q20/q30 percentages of a fastq file (can be gzipped)☆14Aug 31, 2016Updated 9 years ago
- https://filippob.github.io/introduction_to_gwas/☆22Jun 8, 2026Updated 2 months ago
- ☆12Jun 3, 2025Updated last year
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- ☆39Jul 5, 2023Updated 3 years ago
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago