pantsing / flylsh
A Brand New LSH: The fly’s olfactory circuits algorithm
☆11Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for flylsh
- Reader and writer of HDF5 files☆18Updated 7 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 4 years ago
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Updated 5 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Updated 4 years ago
- Go implementation of ntHash☆20Updated 3 years ago
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Updated 3 years ago
- Yet Another CWL Engine by Golang☆18Updated 5 years ago
- Burrows-Wheeler Transform and FM-index in golang☆20Updated last year
- workflow and resource management system for bioinformatics data analysis☆69Updated 4 years ago
- ☆12Updated last year
- example applications built using bíogo☆18Updated 3 years ago
- bíogo data store repository☆38Updated 4 years ago
- Bioinformatic infrastructure libraries☆77Updated 4 years ago
- BottomK minwise hashing for streaming set similarity☆42Updated 5 years ago
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Updated 3 years ago
- Generate kmers/minimizers/hashes/MinHash signatures, including with multiple kmer sizes.☆24Updated 3 years ago
- Simple and fast MinHash implementation in C with Python wrapper☆13Updated 4 years ago
- Fast Scalable Minimal Perfect Hash for Large Keysets☆32Updated 4 years ago
- Go / Golang Bioinformatics Library☆40Updated last month
- Compute cluster (HPC) job submission library for Go (#golang) based on the open DRMAA standard.☆48Updated 4 months ago
- succinct labeled graphs with collections and paths☆15Updated 6 years ago
- MIcrobiomes using Compressive Acceleration☆17Updated 6 years ago
- Minhash and maxhash library in Python, combining flexibility, expressivity, and performance.☆21Updated 2 months ago
- open files for buffered reading and writing in #golang☆61Updated 2 years ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Updated 3 years ago
- biogo high throughput sequencing repository☆125Updated 7 months ago
- Language and framework for high performance computational pipelines.☆148Updated 3 months ago
- FM-index representation of a de Bruijn graph☆27Updated 7 years ago
- Go port of wyhash v3☆13Updated 2 years ago
- Histosketching Using Little Kmers☆55Updated last year