wijerasa / Qiime2_Pipeline
16s Qiime2 pipeline
☆13Updated 6 years ago
Alternatives and similar repositories for Qiime2_Pipeline:
Users that are interested in Qiime2_Pipeline are comparing it to the libraries listed below
- Microbiome Protocol eBook related documents and scripts.☆48Updated 3 years ago
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 6 months ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆41Updated 4 years ago
- ☆45Updated 5 years ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 7 months ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 5 years ago
- Scripts for stat and plot figures in rice microbiome paper☆19Updated 5 years ago
- Course material for the metagenomics course☆44Updated 3 years ago
- Metagenome analysis pipeline☆96Updated 3 years ago
- Code and analysis results for the CRC shotgun meta-analysis☆38Updated 2 years ago
- A simple plot library☆51Updated 7 years ago
- ☆20Updated 5 years ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆108Updated last year
- ☆85Updated 11 months ago
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆32Updated 6 years ago
- ☆56Updated last year
- iMeta teaches you to plot☆52Updated last year
- ☆13Updated 4 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆30Updated 2 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆29Updated last year
- ☆50Updated 6 years ago
- ☆39Updated last year
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆115Updated 11 months ago
- Statistical Analysis of Metagenomic Profiles☆93Updated 5 years ago
- Metagenomic sequence data analysis pipeline☆29Updated 4 months ago
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- This RNAseq data analysis tutorial is created for educational purpose☆32Updated last month
- My own tools code for NGS data analysis (Next Generation Sequencing)☆29Updated 5 years ago
- R implementation of the LEfSe method☆58Updated this week
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆49Updated last year