Ready-made Taxonomic Weights Repository
☆26Mar 31, 2022Updated 4 years ago
Alternatives and similar repositories for readytowear
Users that are interested in readytowear are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast implementation of KofamScan optimized for high-memory systems using PyHMMER☆18Jan 13, 2026Updated 3 months ago
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆32Jun 9, 2023Updated 2 years ago
- Generate Galaxy tool descriptions automatically from QIIME 2 actions.☆20Apr 9, 2026Updated 3 weeks ago
- Metabolic scanning and annotation of Metagenomes☆10Dec 18, 2025Updated 4 months ago
- ☆13Apr 22, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Code referenced in the manuscript 'The 16S rRNA gene for species and strain-level microbiome analysis'☆11Sep 26, 2019Updated 6 years ago
- **DEFUNCT** dada2-based Nextflow pipeline for multiple amplicon data. See website for up-to-date version☆20Nov 1, 2019Updated 6 years ago
- Bash pipeline for analysis of ONT full-length 16S sequences in QIIME2☆29Feb 3, 2020Updated 6 years ago
- Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…☆11Jul 13, 2020Updated 5 years ago
- R shiny app for interactive microbiome analysis☆56Jun 5, 2025Updated 11 months ago
- This is a repository for CAMPER.☆17Mar 18, 2024Updated 2 years ago
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆25Jan 24, 2024Updated 2 years ago
- ☆19Nov 11, 2024Updated last year
- An R package with toolkits for tong's friends☆11Mar 18, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- QIIME 2 plugin supporting taxonomic classification☆20Apr 29, 2026Updated last week
- ☆25Apr 20, 2023Updated 3 years ago
- Analysis tool for Nanopore sequencing data☆11Apr 26, 2024Updated 2 years ago
- ☆13Jul 16, 2022Updated 3 years ago
- Used to trim off the primer sequence from mutiplex amplicon sequencing☆24Dec 20, 2025Updated 4 months ago
- raw data from tax-credit project☆14Sep 19, 2019Updated 6 years ago
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- Show source locations of core methods and subs☆11Jan 17, 2023Updated 3 years ago
- Pipelines used in the lab.☆15Mar 26, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- NanoCLUST is an analysis pipeline for UMAP-based classification of amplicon-based full-length 16S rRNA nanopore reads☆115Nov 20, 2023Updated 2 years ago
- Repository with materials for the Speeding Up Science Workshops at UC Davis☆10Oct 31, 2019Updated 6 years ago
- QGIS svg icons - Animal silhouettes☆12Nov 17, 2018Updated 7 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆31Mar 27, 2026Updated last month
- code for Numerical Ecology with R☆35Aug 7, 2018Updated 7 years ago
- workflows for offline analysis of 16S rRNA Nanopore data☆17Jun 13, 2023Updated 2 years ago
- TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region☆22Updated this week
- ☆22Apr 13, 2026Updated 3 weeks ago
- A Port of SparCC by Yonatan Friedman to Python3☆17Feb 14, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An efficient tool for cross-population fixation index estimation on variant call format files☆11Mar 1, 2026Updated 2 months ago
- Inference of microbial interaction networks from large-scale heterogeneous abundance data☆92Oct 9, 2025Updated 6 months ago
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- 16s Qiime2 pipeline☆17Sep 26, 2018Updated 7 years ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆24Jun 9, 2021Updated 4 years ago
- R package for searching, downloading and analysis of EBI MGnify metagenomics data☆23Feb 13, 2026Updated 2 months ago
- Feature Frequency Profile(FFP) two core programs☆13Apr 3, 2026Updated last month