allenlab / QIIME2_16S_ASV_protocolLinks
☆14Updated 4 years ago
Alternatives and similar repositories for QIIME2_16S_ASV_protocol
Users that are interested in QIIME2_16S_ASV_protocol are comparing it to the libraries listed below
Sorting:
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated last month
- R implementation of the LEfSe method☆59Updated 2 months ago
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 9 months ago
- ☆56Updated last year
- ☆16Updated 2 years ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆119Updated last year
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆32Updated 6 years ago
- Course material for the metagenomics course☆44Updated 3 years ago
- Statistical Analysis of Metagenomic Profiles☆93Updated 5 years ago
- Scripts for stat and plot figures in rice microbiome paper☆19Updated 6 years ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆112Updated last year
- Nanopore data analysis in R☆40Updated last year
- Visualize microbiome data with black magic ggtree☆68Updated 4 years ago
- ☆45Updated 5 years ago
- Code and analysis results for the CRC shotgun meta-analysis☆39Updated 2 years ago
- MaAsLin2: Microbiome Multivariate Association with Linear Models☆144Updated 8 months ago
- Transform files to the microtable object with microeco package☆27Updated 3 months ago
- Analysis of (gut) microbiome in Qiime2 and R.☆20Updated 10 months ago
- R package for downstream Microbiome analysis☆28Updated 7 months ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 6 years ago
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆41Updated 5 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆26Updated 2 years ago
- Make Picrust2 Output Analysis and Visualization Easier☆143Updated last week
- Reproducible Analyses accompanying DADA2 + PacBio Manuscript☆32Updated 4 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆33Updated 2 years ago
- Microbiome Protocol eBook related documents and scripts.☆48Updated 4 years ago
- ☆86Updated last year
- Metagenome analysis pipeline☆99Updated 3 years ago
- Statistics and visualization for amplicon data☆70Updated 2 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 3 months ago