MariaNattestad / BioCoding_Tutorial
A tutorial in Python where all the examples teach students about biology. Written for high school students with no previous experience.
☆19Updated 9 years ago
Related projects ⓘ
Alternatives and complementary repositories for BioCoding_Tutorial
- Scripts and data for Plotting in R for Biologists, a video course on YouTube☆55Updated 4 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆45Updated 10 months ago
- ☆47Updated 3 years ago
- Error correction for Illumina RNA-seq reads☆63Updated 8 months ago
- A small-RNA sequencing analysis pipeline☆74Updated last week
- Issue tracker for the Biostar Handbook☆57Updated 2 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆46Updated last week
- Quantification of transposable element expression using RNA-seq☆64Updated 9 months ago
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆13Updated 2 months ago
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆45Updated 8 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆19Updated 5 years ago
- HPC based pipelines for variant calling using GATK☆17Updated 4 years ago
- A continually expanding collection of RNA-seq tools☆46Updated last month
- course about NGS data processing: genomics and transcriptomics☆33Updated 3 years ago
- Unsorted scripts for bioinformatics☆59Updated 3 years ago
- Scripts for next generation sequencing☆47Updated 5 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆53Updated 3 years ago
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆32Updated last year
- A practical guide to build de-novo transcriptome assemblies for non-model organisms (described in Montero-Mendieta et al. 2017).☆28Updated 7 years ago
- Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.☆16Updated 5 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆47Updated 4 years ago
- Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference gen…☆137Updated 2 weeks ago
- circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data☆45Updated last month
- my bin directory☆44Updated 2 weeks ago
- ☆53Updated 3 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆72Updated 3 years ago
- Master of Pores 2☆23Updated last year
- Variant Calling Pipeline Using GATK4 and Nextflow☆53Updated last year
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆77Updated last year
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆32Updated 3 years ago