DSIMB / MEDUSA
A Deep Learning based protein flexibility prediction tool.
☆8Updated last year
Related projects: ⓘ
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆32Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 2 years ago
- This repo contains the collection of codes to find designer interfacial mutations☆16Updated last year
- ☆31Updated last month
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆22Updated 3 years ago
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆37Updated 6 months ago
- ☆10Updated last year
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆18Updated 5 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆37Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆34Updated last year
- Pymol ScrIpt COllection (PSICO)☆57Updated last month
- RosettaDesign using PyRosetta☆27Updated 5 years ago
- Calculation of interatomic interactions in molecular structures☆70Updated 2 weeks ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆22Updated 5 months ago
- Set of useful HADDOCK utility scripts☆45Updated 2 weeks ago
- ☆27Updated 4 months ago
- ☆24Updated 9 months ago
- Python interface for the RCSB PDB search API.☆47Updated this week
- The DSSP building software☆36Updated last year
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆24Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆30Updated last year
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆32Updated last month
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆33Updated 4 years ago
- Source code and examples for AlphaFold Unmasked☆25Updated 3 weeks ago
- ☆9Updated last year
- ☆34Updated 2 years ago
- Tutorial to build AMBER compatable protein+lipid systems☆14Updated 7 years ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆15Updated 7 months ago
- an ultra-fast and accurate program for deterministic protein sidechain packing☆27Updated last year
- De novo design of small molecule binding sites into proteins☆12Updated 3 years ago