Computes FRC from SAM/BAM file and not from afg files
☆17Oct 5, 2018Updated 7 years ago
Alternatives and similar repositories for FRC_align
Users that are interested in FRC_align are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genomic Assemblies Merger for NGS☆26Nov 10, 2023Updated 2 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year
- Contig Ploidy and Allele Dosage Estimation☆11Oct 30, 2015Updated 10 years ago
- Bayesian reconstruction of ancient DNA fragments☆31Aug 6, 2024Updated last year
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Lightweight workflows in bioinformatics:☆24Nov 5, 2014Updated 11 years ago
- Components of genome sequence assembly tools☆21Mar 30, 2022Updated 4 years ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap…☆13Mar 17, 2016Updated 10 years ago
- Scaffolding of genomic assemblies with RNA seq data☆15Oct 8, 2015Updated 10 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47May 27, 2022Updated 4 years ago
- TULIP - The Uncorrected Long read Itegration Pipeline☆27Jan 15, 2018Updated 8 years ago
- Genomics database manager☆25Mar 3, 2014Updated 12 years ago
- KAUST Assembly Read Error Correction Tool☆15Aug 15, 2015Updated 10 years ago
- scripts to parse IrysView output☆39Sep 3, 2015Updated 10 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage☆13May 16, 2016Updated 10 years ago
- Useful small programs☆26Jan 11, 2013Updated 13 years ago
- compare sequences to a shared root reference sequence.☆24Oct 19, 2021Updated 4 years ago
- BioLib brings together a set of opensource libraries written in C/C++ and makes them available for all Bio* languages☆38Oct 5, 2010Updated 15 years ago
- A tutorial for learning de novo assembly☆33Dec 8, 2011Updated 14 years ago
- The MafFilter genome alignment processor☆19Apr 10, 2026Updated 3 months ago
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end reads☆10Oct 17, 2015Updated 10 years ago
- Ray -- Parallel genome assemblies for parallel DNA sequencing☆68Jul 26, 2017Updated 8 years ago
- tools for error correction and working with long read data☆44Dec 1, 2014Updated 11 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 8 years ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆82Apr 30, 2021Updated 5 years ago
- This fork of Illumina/ExpansionHunter introduces new features and optimizations☆17Jul 8, 2026Updated last week
- parallelized blat with multi-threads support☆56Jan 23, 2025Updated last year
- finshingTool☆54Nov 22, 2016Updated 9 years ago
- Reference-based compression of SRA data☆40Mar 26, 2013Updated 13 years ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- NovoGraph: building whole genome graphs from long-read-based de novo assemblies☆46Feb 23, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MUMmer for HPC☆18Jan 7, 2013Updated 13 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated last year
- Simple convertor from bam to FASTQ☆27Jun 30, 2015Updated 11 years ago
- ☆97Sep 21, 2022Updated 3 years ago
- de novo sequence assembler using string graphs☆244Aug 8, 2019Updated 6 years ago
- Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.☆184Jun 9, 2026Updated last month
- Browser based application for viewing bam alignments☆56Dec 16, 2016Updated 9 years ago