uc-cdis / cdis-manifest
Manifests tracking service versions to release to each environment
☆8Updated this week
Alternatives and similar repositories for cdis-manifest
Users that are interested in cdis-manifest are comparing it to the libraries listed below
Sorting:
- data access client☆8Updated last week
- Extensible specification for representing and uniquely identifying biological sequence variation☆88Updated last month
- GA4GH Variation Representation Python Implementation☆56Updated 2 weeks ago
- Public repository for VariantValidator project☆75Updated last week
- A repository for the schemas used for the Data Repository Service.☆61Updated last month
- Workflows for converting between sequence data formats☆38Updated 3 years ago
- This is the repository for the Python based program for automated deep phenotype analysis of clinical information using large language mo…☆10Updated 3 weeks ago
- A collection of reusable WDL tasks. Category:Other☆87Updated 2 weeks ago
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Updated 5 years ago
- ☆44Updated last week
- A Python package for pharmacogenomics (PGx) research☆73Updated 3 months ago
- Deploy Gen3 using Docker compose☆14Updated 3 months ago
- IGV Web App☆121Updated this week
- A modular annotation tool for genomic variants☆121Updated this week
- Project code for BioHackathon Europe 2024.☆21Updated 6 months ago
- Alignment workflow for Kids-First DRC☆11Updated this week
- ☆177Updated last year
- Annotates variants in MAF with OncoKB annotation.☆130Updated this week
- ☆82Updated 6 years ago
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆150Updated 3 months ago
- Repository for the GA4GH phenopacket schema☆86Updated 7 months ago
- This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are al…☆78Updated 5 years ago
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆109Updated 6 years ago
- Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders☆144Updated 2 weeks ago
- Workflows for germline short variant discovery with GATK4☆136Updated 4 years ago
- Example Nextflow pipelines and programming techniques☆107Updated this week
- Explore gnomAD datasets on the web☆84Updated last week
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆28Updated 3 weeks ago
- A structural variation pipeline for short-read sequencing☆187Updated this week
- Backend server for Genome Nexus☆41Updated last month