GPU accelerated beam propagation tools for biological light tissue simulations
☆38Sep 29, 2018Updated 7 years ago
Alternatives and similar repositories for biobeam
Users that are interested in biobeam are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆55May 20, 2024Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆73Apr 6, 2026Updated 3 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- python functions for simulating optical transfer functions☆83Apr 8, 2024Updated 2 years ago
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Dec 2, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated last year
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14May 13, 2020Updated 5 years ago
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆42Updated this week
- Blueprints for a low-cost laser combiner compatible with wide-field and localization microscopy.☆56Jul 24, 2020Updated 5 years ago
- TensorFlow Deconvolution for Microscopy Data☆91Apr 29, 2022Updated 4 years ago
- GPU accelerated volume rendering / processing in Python☆120Mar 21, 2019Updated 7 years ago
- Lucy-Richardson deconvolution algorithm☆29Feb 16, 2022Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆48Apr 9, 2026Updated 3 weeks ago
- Create 3D/4D animations using a natural language-based syntax☆61Jun 6, 2025Updated 10 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Image acquisition software for mesoSPIM light-sheet microscopes.☆46Apr 28, 2026Updated last week
- Software for camera acquisition and tracking of particles☆11Nov 22, 2022Updated 3 years ago
- Implementation of 3d non-separable convolution using CUDA & FFT Convolution☆20Jan 15, 2019Updated 7 years ago
- A python toolkit for fluorescence microscopy.☆22Updated this week
- ImageJ plugins for blind decomposition of fluorencence microscopy data☆10Mar 24, 2015Updated 11 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆24Oct 30, 2024Updated last year
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 2 years ago
- Various parts made for fluorescence microscopy + optics work☆17Jul 22, 2019Updated 6 years ago
- AutoPilot library☆15Nov 15, 2016Updated 9 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Python interface to Optotune focus-tunable lenses☆14Feb 4, 2020Updated 6 years ago
- A suite of utilities of analyzing optical glasses using the Zemax glass library☆50Apr 26, 2026Updated last week
- GPU accelerated image/volume processing in Python☆113Feb 10, 2026Updated 2 months ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Apr 1, 2025Updated last year
- C and NVidia CUDA code for multi-view deconvolution☆12Jul 25, 2016Updated 9 years ago
- ☆17Jan 13, 2025Updated last year
- SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging☆16Nov 22, 2016Updated 9 years ago
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Mar 2, 2019Updated 7 years ago
- Github Pages☆13Apr 29, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This is PyFocus, a Python package that provides high-level functions and an user interface to perform full vectorial calculations of the …☆17May 17, 2023Updated 2 years ago
- Codes for 3D Deconvolution of Microscopy Images☆26Mar 19, 2018Updated 8 years ago
- Hardware documentation for the mesoSPIM microscope project☆34Aug 21, 2025Updated 8 months ago
- A collection of 3D image processing functions and applications with GPU implementation☆14Feb 26, 2021Updated 5 years ago
- NOVO-CGH algorithm implemented in Matlab for 3D CGH☆24Mar 19, 2019Updated 7 years ago
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 7 months ago
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Jan 20, 2026Updated 3 months ago