micro-manager / NDStorage
N-dimensional, multiresolution file format for Micro-Manager
☆12Updated 5 months ago
Alternatives and similar repositories for NDStorage:
Users that are interested in NDStorage are comparing it to the libraries listed below
- Python bindings for MMCore, Micro-Manager's device control layer☆33Updated 3 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 4 months ago
- ☆36Updated 3 weeks ago
- A set of Qt-based widgets onto the pymmcore-plus model☆12Updated last week
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated 6 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆61Updated last month
- python tools for BigDataViewer☆21Updated 2 weeks ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- General-purpouse camera capture plugin for data streaming to napari☆22Updated 10 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆48Updated this week
- GPU accelerated 3D image deconvolution using CUDA☆34Updated 6 months ago
- An open-source Python library for the analysis of fluorescence lifetime and hyperspectral images using the phasor approach.☆24Updated this week
- ☆16Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆53Updated 2 years ago
- Linking napari layers with Matplotlib plots☆39Updated this week
- rapidSTORM open-source localization microscopy software☆17Updated 6 years ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆20Updated this week
- MiC is an ImageJ plugin to compare segmentation masks☆17Updated 6 months ago
- Speed up coding/extending image analysis in Python.☆30Updated last week
- GPU-accelerated image processing for everyone☆50Updated 6 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- A 3D interactivity toolbox for napari☆32Updated last month
- ☆21Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆60Updated last week
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated last month
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆71Updated 2 months ago
- ☆21Updated 3 years ago
- Use ImageJ functionality from napari☆25Updated 3 weeks ago
- A self-supervised denoising algorithm.☆24Updated 9 months ago
- PSFj - Know your microscope fluorescence☆21Updated 4 years ago