micro-manager / NDStorageLinks
N-dimensional, multiresolution file format for Micro-Manager
☆13Updated last year
Alternatives and similar repositories for NDStorage
Users that are interested in NDStorage are comparing it to the libraries listed below
Sorting:
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 11 months ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆66Updated this week
- GPU accelerated 3D image deconvolution using CUDA☆35Updated last year
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆77Updated 2 months ago
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 4 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆43Updated last month
- Pure Python library for reading NIS Elements ND2 images and metadata☆47Updated 6 months ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆19Updated this week
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated last week
- Lattice light-sheet post-processing utility.☆29Updated this week
- Process images using SimpleITK in napari☆21Updated 3 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆78Updated last month
- ☆19Updated 3 months ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆22Updated 4 months ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Updated last year
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- MIST-inspired microscope image stitching package☆74Updated last year
- ☆38Updated last year
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆70Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 3 weeks ago
- navigate - open source light-sheet microscope controls☆37Updated this week
- Create 3D/4D animations using a natural language-based syntax☆60Updated 2 months ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆34Updated 2 months ago
- 3D visualizer to visualize CLSM and FIB-SEM microscope imaging modalities☆9Updated 2 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆44Updated 2 weeks ago
- ImageJ convenience layer for N5☆17Updated last week