computational-imaging / ThreeDeconv.jlLinks
A convex 3D deconvolution algorithm for low photon count fluorescence imaging
☆33Updated 4 years ago
Alternatives and similar repositories for ThreeDeconv.jl
Users that are interested in ThreeDeconv.jl are comparing it to the libraries listed below
Sorting:
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆29Updated 3 months ago
- A package for processing diSPIM images with GPU implementation☆14Updated 4 years ago
- Official implementation of Ring Deconvolution Microscopy from https://www.nature.com/articles/s41592-025-02684-5☆55Updated 4 months ago
- Learning the experimental design for Fourier Ptychographic Microscopy☆53Updated 5 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆54Updated last year
- A collection of 3D image processing functions and applications with GPU implementation☆14Updated 4 years ago
- Codes for 3D Deconvolution of Microscopy Images☆26Updated 7 years ago
- Java (ImageJ/Fiji) software package for 3D deconvolution microscopy☆63Updated 6 years ago
- code of the registration and deconvolution project☆36Updated 4 years ago
- 3D Structured illumination microscopy (3D-SIM) reconstruction software☆32Updated last year
- STED simulation platform written in Python☆14Updated last year
- SLM binary mask generator for Lattice Light Sheet microscopy☆12Updated 4 years ago
- Optimization framework developed in Pytorch, allowing calibration, and joint optimization of optics and deep learning models.☆56Updated 3 years ago
- python functions for simulating optical transfer functions☆81Updated last year
- A unifying Matlab framework for the development of reconstruction algorithms (solving inverse problems) in computational imaging☆90Updated 2 weeks ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Updated 5 years ago
- ☆15Updated 4 years ago
- Image deconvolution algorithms in python☆23Updated 3 years ago
- Automatic Correction for sCMOS-related Noise☆18Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆48Updated 3 months ago
- Differentiable 4f microscope/phase mask simulation☆10Updated 11 months ago
- TensorFlow Deconvolution for Microscopy Data☆91Updated 3 years ago
- ☆31Updated 3 years ago
- Python code for wavefront shaping☆24Updated last week
- OpenSIM matlab code☆57Updated 9 years ago
- Matlab function to import ROIs from ImageJ☆27Updated 6 years ago
- Code for running a multicolor structured illumination microscopy (SIM) experiment using a DLP6500 digital micromirror device (DMD) and pe…☆66Updated last month
- Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy☆97Updated this week
- PSF simulation and 3D Deconvolution for Light-Field Microscopy in Julia☆11Updated 6 years ago
- STORM movie analysis code☆122Updated last year