Alternatives and similar repositories for proteogan

Users that are interested in proteogan are comparing it to the libraries listed below

• pgmikhael / clipzyme
  Reaction-Conditioned Virtual Screening of Enzymes
  ☆39Updated 4 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• dahjan / DMS_opt
  ☆72Updated 5 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 4 years ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆47Updated last year
• alexechu / protpardelle
  ☆65Updated 2 years ago
• wengong-jin / abdockgen
  ☆107Updated 2 years ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆86Updated 4 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆32Updated 2 years ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆45Updated 10 months ago
• luoyunan / ECNet
  An evolutionary context-integrated deep learning framework for protein engineering
  ☆65Updated 3 years ago
• bjornwallner / alphafoldv2.2.0
  Open source code for AlphaFold.
  ☆39Updated 2 years ago
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆49Updated last week
• Liuxg16 / GeoPPI
  ☆86Updated 3 years ago
• smiles724 / ProtMD
  ☆64Updated 4 months ago
• ai4protein / VenusFSFP
  VenusFSFP: Few-Shot Protein Fitness Prediction
  ☆96Updated 2 months ago
• sarisabban / RMSD
  Calculate the RMSD between two protein structures
  ☆12Updated 3 years ago
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 5 years ago
• Barabasi-Lab / AI-Bind
  Interpretable AI pipeline improving binding predictions for novel protein targets and ligands
  ☆40Updated last year
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆119Updated 7 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• levinthal / Pallatom
  ☆119Updated 4 months ago
• WeiLab-Biology / DeepProSite
  ☆34Updated last year
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆58Updated last month
• wengong-jin / DSMBind
  ☆94Updated last year
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆82Updated last year
• MattMcPartlon / AttnPacker
  Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"
  ☆89Updated last year
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆50Updated last month
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆142Updated last year
• instadeepai / FrameDiPT
  FrameDiPT: an SE(3) diffusion model for protein structure inpainting
  ☆57Updated last year