sckott / pytaxaLinks
taxonomic classes for Python
☆11Updated 3 years ago
Alternatives and similar repositories for pytaxa
Users that are interested in pytaxa are comparing it to the libraries listed below
Sorting:
- This site provides information on conducting reproducible science using the R language.☆13Updated 8 years ago
- Reproducible Phylogenomics☆22Updated 8 years ago
- taxonomic classes for R☆48Updated last year
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Updated 9 years ago
- Common repository for scripts to generate trees from taxonomies. Currently includes ITIS, NCBI, and GBIF.☆16Updated 9 years ago
- Access sequences from the 1000 Plant Initiative (1KP)☆13Updated 2 years ago
- R/Shiny application for viewing microbial community data☆19Updated 4 years ago
- Phylocom R interface☆15Updated 2 years ago
- Exploring tree diversity☆14Updated 8 years ago
- Conversations about teaching computational skills to undergraduates☆12Updated 3 years ago
- An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data☆19Updated last year
- Create and Query a Local Copy of GenBank in R☆27Updated 3 months ago
- repo for 2016 EDAMAME tutorials☆11Updated 8 years ago
- Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…☆25Updated 4 years ago
- ☆18Updated 9 years ago
- This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…☆16Updated last year
- ☆15Updated 9 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Updated last year
- babette is an R package to work with BEAST2☆46Updated 2 weeks ago
- phylogenetic networks using ggplot2 and ggtree☆13Updated 6 months ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆24Updated 11 months ago
- package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/☆12Updated last year
- I can haz all the phylogenies☆20Updated 2 years ago
- ☆11Updated last month
- A book for teaching people how to do comparative methods in R☆22Updated last year
- An R package for manipulating phylogentic trees☆11Updated 4 years ago
- My blog.☆16Updated 5 months ago
- multi-tool QC for minion data☆9Updated 7 years ago
- Ordination lectures for Ecological Methods in Oulu☆19Updated 10 months ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago