tanelp / deepyeast
Implementation of "Accurate classification of protein subcellular localization from high throughput microscopy images using deep learning".
☆12Updated 2 years ago
Alternatives and similar repositories for deepyeast:
Users that are interested in deepyeast are comparing it to the libraries listed below
- Analysis and figure code from Alley et al. 2019.☆58Updated last year
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆56Updated 3 years ago
- Python package for processing image-based profiling data☆101Updated last week
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆71Updated 10 months ago
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 5 years ago
- Protein function prediction using a variational autoencoder☆93Updated 7 years ago
- inferring sequence-structure motifs using deep learning☆37Updated last year
- A convolutional neural network to predict PPI interactions☆41Updated 6 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆24Updated 5 years ago
- Paratope Prediction using Deep Learning☆59Updated last year
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- PSIPRED Protein Secondary Structure Predictor☆53Updated 4 months ago
- "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy☆32Updated 5 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- PyTorch library of layers acting on protein representations☆117Updated 8 months ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆65Updated 2 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- Analysis workflow for investigating the structural context of PTMs☆11Updated last year
- Reimplementation of the UniRep protein featurization model.☆104Updated 6 months ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆46Updated 7 months ago
- ☆55Updated 5 years ago
- A Python package for extracting protein sequence features☆58Updated 2 years ago
- Fully convolutional neural networks for protein residue-residue contact prediction☆44Updated 5 years ago
- Repository for the paper "Optimal design of stochastic DNA synthesis protocols based on generative sequence models" (Weinstein et al., AI…☆33Updated 3 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Updated 5 years ago
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25Updated 4 years ago
- Python package and command line tool for epitope prediction☆51Updated 7 months ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆44Updated 5 years ago