tanelp / deepyeast
Implementation of "Accurate classification of protein subcellular localization from high throughput microscopy images using deep learning".
☆13Updated 2 years ago
Alternatives and similar repositories for deepyeast:
Users that are interested in deepyeast are comparing it to the libraries listed below
- De novo protein structure prediction using iteratively predicted structural constraints☆55Updated 3 years ago
- Analysis and figure code from Alley et al. 2019.☆58Updated last year
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆71Updated 9 months ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 5 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 7 years ago
- Paratope Prediction using Deep Learning☆59Updated last year
- Processed Cell Painting Data for the LINCS Drug Repurposing Project☆26Updated 2 years ago
- Linear-Time Approximation of RNA Folding Partition Function and Base Pairing Probabilities☆29Updated 8 months ago
- Protein function prediction using a variational autoencoder☆93Updated 6 years ago
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 5 years ago
- Neural networks for deep mutational scanning data☆67Updated 2 months ago
- A Python package for extracting protein sequence features☆58Updated 2 years ago
- DeepContact Software☆26Updated 6 years ago
- A convolutional neural network to predict PPI interactions☆41Updated 6 years ago
- KinDEL is a large DNA-encoded library dataset containing two kinase targets (DDR1 and MAPK14) for benchmarking machine learning models.☆17Updated 3 months ago
- inferring sequence-structure motifs using deep learning☆37Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆64Updated 2 years ago
- MusiteDeep provides a deep-learning method for general and kinase-specific phosphorylation site prediction. It is implemented by deep lea…☆48Updated 5 months ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Towards Gene Expression Convolutions using Gene Interaction Graphs☆74Updated 3 years ago
- Function prediction using a deep ontology-aware classifier☆81Updated 2 years ago
- ☆23Updated last year
- ☆25Updated 5 years ago
- Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Pa…☆36Updated last year
- Python package for processing image-based profiling data☆85Updated last week
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- Protein sequence classification with self-supervised pretraining☆83Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆64Updated last year
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆34Updated 3 years ago
- Lists and 384-well plate maps of compounds and genetic perturbations designed to assess connectivity in profiling assays☆20Updated 3 weeks ago