swharden / SWHLab
Python tools for analysis of whole-cell patch-clamp electrophysiological data
☆23Updated 6 years ago
Alternatives and similar repositories for SWHLab:
Users that are interested in SWHLab are comparing it to the libraries listed below
- SpikeGLX recording system GUI [Neuropixels NI]☆86Updated this week
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆99Updated 3 months ago
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆9Updated 3 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Tools to work with Allen Inst CCF data in matlab☆130Updated last year
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated last week
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Image processing and tools for widefield imaging☆18Updated 5 years ago
- Archived code for reading data saved by the Open Ephys GUI☆60Updated last year
- Histology processing☆65Updated 3 weeks ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆72Updated last month
- A program for viewing and analyzing electrophysiological data☆55Updated this week
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 3 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆73Updated 3 months ago
- pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files☆105Updated 5 months ago
- offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.☆54Updated last year
- ☆51Updated 7 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 5 years ago
- cortex lab code for electrophysiology☆80Updated last year
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆41Updated 7 months ago
- GPU code for spike sorting☆181Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆48Updated last year
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated 10 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆136Updated last week
- ☆11Updated 8 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆118Updated 2 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆27Updated 3 years ago