swharden / SWHLabLinks
Python tools for analysis of whole-cell patch-clamp electrophysiological data
☆24Updated 6 years ago
Alternatives and similar repositories for SWHLab
Users that are interested in SWHLab are comparing it to the libraries listed below
Sorting:
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆105Updated 8 months ago
- Tools to work with Allen Inst CCF data in matlab☆139Updated last month
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files☆108Updated 10 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆93Updated last week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆51Updated last year
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- A program for viewing and analyzing electrophysiological data☆58Updated last week
- offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.☆54Updated last month
- Histology processing☆69Updated last month
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 8 months ago
- GPU code for spike sorting☆186Updated last year
- Archived code for reading data saved by the Open Ephys GUI☆61Updated 2 years ago
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- ☆52Updated last year
- cell detection in calcium imaging recordings☆399Updated last week
- Elephant is the Electrophysiology Analysis Toolkit☆220Updated 5 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆93Updated 9 months ago
- a visualization method for neural data☆235Updated 4 months ago
- Functions to assess quality of spike sorting results☆34Updated last year
- Open Ephys plugins for tracking experiments☆11Updated 5 years ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 3 months ago
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆11Updated 8 months ago
- "Approaches to Study Neural Circuits" course☆66Updated 8 months ago
- A Python interface to access neuroanatomical atlases☆156Updated this week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆130Updated 2 months ago
- Lightweight electrophysiological data analysis library☆14Updated last month
- Registration of cells across sessions.☆75Updated last year