simonarvin / braincoordinator
Open-source stereotaxic coordinator
☆15Updated 2 years ago
Alternatives and similar repositories for braincoordinator:
Users that are interested in braincoordinator are comparing it to the libraries listed below
- Histology processing☆65Updated last week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated last week
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Web app for viewing results of ephys spike sorting☆25Updated last month
- ☆51Updated 7 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆37Updated 6 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- pyqt5 dependent applications for IBL sessions☆26Updated last week
- Algorithm for automated source extraction from 1P data☆21Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated last week
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Fiber photometry analysis☆22Updated 3 weeks ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated 3 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆57Updated 3 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆120Updated 2 months ago
- Browser-based NWB visualization and DANDI exploration☆55Updated last week
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 3 months ago
- Registration of cells across sessions.☆75Updated 8 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated last month
- For displaying spherically corrected visual stimulus on a flat screen.☆9Updated 3 months ago
- Code for Functional Mixed Models for Fiber Photometry☆11Updated last month
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆22Updated 3 weeks ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- Region Of Interest Classification and Tracking☆18Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month
- Python package to handle probe layout, geometry and wiring to device.☆61Updated this week
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year