Alternatives and similar repositories for SanPy

Users that are interested in SanPy are comparing it to the libraries listed below

• MetaCell / nwb-explorer
  NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files
  ☆26Updated last month
• BlueBrain / snap
  The Blue Brain Pythonic Simulation and Network Analysis Productivity layer
  ☆20Updated 7 months ago
• morphonets / SNT
  The ImageJ framework for quantification of neuronal anatomy
  ☆52Updated this week
• btorb / btmorph_v2
  btmorph v2. Object-oriented library to analyze neuronal structure
  ☆12Updated 7 years ago
• NeurodataWithoutBorders / nwb-schema
  Data format specification schema for the NWB neurophysiology data format
  ☆59Updated last month
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆62Updated last year
• BlueBrain / BluePyEfe
  BluePyEfe: Blue Brain Python E-feature extraction
  ☆16Updated 7 months ago
• NeurodataWithoutBorders / nwbwidgets
  Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
  ☆50Updated last month
• swharden / pyABF
  pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
  ☆110Updated 11 months ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆60Updated last week
• INM-6 / viziphant
  Visualization of electrophysiological data from Elephant
  ☆24Updated 11 months ago
• INCF / neuroscience-data-structure
  Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …
  ☆22Updated 2 years ago
• NeurodataWithoutBorders / nwbinspector
  Tool to help inspect NWB files for compliance with NWB Best Practices
  ☆20Updated this week
• AllenInstitute / ipfx
  computes intrinsic cell features from intracellular electrophysiology data
  ☆27Updated 2 weeks ago
• brainglobe / brainglobe-atlasapi
  A Python interface to access neuroanatomical atlases
  ☆158Updated last week
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆46Updated 10 months ago
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆26Updated 3 weeks ago
• NeuralEnsemble / ephyviewer
  Simple viewers for ephys signals, events, video and more
  ☆57Updated 2 weeks ago
• cortex-lab / Rigbox
  A MATLAB toolbox for running behavioral neuroscience experiments and managing data
  ☆32Updated last year
• INCF / Scalable-Brain-Atlas
  Source code of the Scalable Brain Atlas website (scalablebrainatlas.incf.org)
  ☆14Updated 9 years ago
• AllenInstitute / neuron_morphology
  Tools for working with single-neuron morphological reconstructions
  ☆22Updated last year
• NeuralEnsemble / MotionClouds
  Synthesizing moving textures with parameterized features
  ☆15Updated 3 years ago
• catalystneuro / nwb-conversion-tools
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆25Updated 2 years ago
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆44Updated this week
• NeurodataWithoutBorders / pynwb
  A Python API for working with Neurodata stored in the NWB Format
  ☆200Updated this week
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆63Updated this week
• OCNS / SoftwareWG
  The primary housekeeping repository for the INCF/OCNS Software Working Group, and the sources for the web site.
  ☆11Updated 7 months ago
• losonczylab / sima
  Python package for analysis of dynamic fluorescence microscopy data
  ☆102Updated 6 years ago
• alejoe91 / MEAutility
  Python package for multi-electrode array handling and stimulation
  ☆12Updated 3 months ago
• AllenInstitute / drcme
  Dimensionality-reduction and classification for morphology and electrophysiology
  ☆13Updated last year