Hjorthmedh / Snudda
Create realistic networks of neurons, synapses placed using touch detection between axons and dendrites
☆30Updated last week
Alternatives and similar repositories for Snudda:
Users that are interested in Snudda are comparing it to the libraries listed below
- Electrophys Feature Extraction Library☆71Updated 2 months ago
- Elephant is the Electrophysiology Analysis Toolkit☆210Updated last month
- Optimization of single-cell biophysically detailed models☆15Updated 4 years ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆95Updated this week
- Collaboration between BBP and AIBS☆58Updated 9 months ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- A tutorial on neuroinformatics resources for computational modellers☆65Updated 5 years ago
- A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks…☆158Updated 3 weeks ago
- Examples of using MountainSort spike sorting software.☆27Updated 5 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆98Updated this week
- WIP: Python port of Kilosort2☆51Updated last year
- A SciUnit library for validation testing of spiking neural network models.☆16Updated 9 months ago
- Fast and scalable spike sorting in python☆89Updated last year
- IBL core shared libraries☆63Updated last week
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆44Updated 6 years ago
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- A large-scale spiking model of the vision-related areas of macaque cortex.☆73Updated last month
- Visualization of electrophysiological data from Elephant☆23Updated 6 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆121Updated 3 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆55Updated last year
- Some python functions to supplement the NEURON python module☆29Updated 5 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆100Updated 5 months ago
- Recordings of 10k neurons during spontaneous behaviors☆51Updated last year
- A Matlab interface for reading and writing NWB files☆52Updated this week
- This reading list is centered around the practical application of linear dynamical systems models to predict neural data☆38Updated 3 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆114Updated 8 months ago
- Deconvolution of calcium imaging data☆93Updated 3 months ago
- Automatic spike sorting up to 64 channels☆53Updated 4 years ago
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆28Updated 6 years ago
- Main repository for IBL rig code☆22Updated last week