ahwillia / PyNeuron-Toolbox
Some python functions to supplement the NEURON python module
☆27Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for PyNeuron-Toolbox
- SpikeForest -- spike sorting analysis for website☆16Updated 4 years ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆31Updated last year
- Optimization of single-cell biophysically detailed models☆15Updated 4 years ago
- Recordings of 10k neurons during spontaneous behaviors☆50Updated 8 months ago
- non-parametric inference for convolutional filters in poisson glms☆13Updated 3 years ago
- IBL core shared libraries☆61Updated this week
- Main repository for IBL rig code☆22Updated this week
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆16Updated 7 years ago
- Pytorch implementation of LocaNMF☆34Updated 4 years ago
- DataJoint pipeline for IBL project☆21Updated last year
- ☆46Updated 2 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆33Updated last year
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆43Updated 5 years ago
- IaC codebase for the NeuroCAAS Platform☆34Updated 11 months ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 6 years ago
- Deconvolution of calcium imaging data☆84Updated 2 months ago
- A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆19Updated last year
- Grid cell data analysis package.☆6Updated 9 years ago
- ☆9Updated 4 years ago
- ☆25Updated 4 months ago
- Everything needed to replicate the figures from the paper "Engineering recurrent neural networks from task-relevant manifolds and dynamic…☆12Updated 4 years ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆62Updated last year
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆26Updated 5 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 2 years ago
- Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)☆13Updated 9 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- Coding exercises for Neural Data Science at CSHL in 2019☆28Updated 4 years ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆25Updated last year