Alternatives and similar repositories for pyABF

Users that are interested in pyABF are comparing it to the libraries listed below

• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆104Updated 6 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• LernerLab / GuPPy
  Guided Photometry Analysis in Python, a free and open-source FP analysis tool.
  ☆75Updated 4 months ago
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆135Updated last week
• tridesclous / tridesclous
  offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.
  ☆54Updated last year
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆116Updated 10 months ago
• NeuralEnsemble / elephant
  Elephant is the Electrophysiology Analysis Toolkit
  ☆214Updated 2 months ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆90Updated 3 weeks ago
• simonarvin / braincoordinator
  Open-source stereotaxic coordinator
  ☆15Updated 2 years ago
• ProjectPyRhO / PyRhO
  A virtual optogenetics laboratory
  ☆37Updated last year
• NeuralEnsemble / ephyviewer
  Simple viewers for ephys signals, events, video and more
  ☆56Updated 7 months ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆20Updated 2 years ago
• Whitlock-Group / HERBS
  ☆52Updated 9 months ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆53Updated last year
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆124Updated last week
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆134Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆144Updated 3 weeks ago
• NeurodataWithoutBorders / nwb-schema
  Data format specification schema for the NWB neurophysiology data format
  ☆57Updated last week
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆74Updated 2 months ago
• petersaj / AP_histology
  Histology processing
  ☆66Updated 2 weeks ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 11 months ago
• HarveyLab / mouseVR
  Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks
  ☆42Updated 10 months ago
• NeurodataWithoutBorders / pynwb
  A Python API for working with Neurodata stored in the NWB Format
  ☆194Updated this week
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆74Updated 6 months ago
• zhuangjun1981 / WarpedVisualStim
  For displaying spherically corrected visual stimulus on a flat screen.
  ☆9Updated 5 months ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆61Updated last week
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆58Updated last year
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆27Updated 3 years ago
• open-ephys / analysis-tools
  Archived code for reading data saved by the Open Ephys GUI
  ☆61Updated 2 years ago