swharden / pyABFLinks
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
☆110Updated 11 months ago
Alternatives and similar repositories for pyABF
Users that are interested in pyABF are comparing it to the libraries listed below
Sorting:
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆106Updated 9 months ago
- A Python interface to access neuroanatomical atlases☆157Updated this week
- Python package for analysis of dynamic fluorescence microscopy data☆101Updated 6 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- Automated 3D cell detection in very large images☆218Updated 2 weeks ago
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated last year
- A Python API for working with Neurodata stored in the NWB Format☆200Updated this week
- SpikeGLX recording system GUI [Neuropixels NI]☆96Updated this week
- Simple viewers for ephys signals, events, video and more☆57Updated last week
- ☆34Updated 4 months ago
- Elephant is the Electrophysiology Analysis Toolkit☆220Updated 5 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Updated 2 weeks ago
- ☆52Updated last year
- Open-source stereotaxic coordinator☆15Updated 2 years ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆77Updated this week
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- Data format specification schema for the NWB neurophysiology data format☆59Updated 3 weeks ago
- computes intrinsic cell features from intracellular electrophysiology data☆27Updated last week
- A modular package to control stimulation and track behaviour☆46Updated 10 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated this week
- Histology processing☆69Updated last week
- Deconvolution of calcium imaging data☆98Updated 7 months ago
- Tools to work with Allen Inst CCF data in matlab☆140Updated 2 months ago
- cell detection in calcium imaging recordings☆402Updated 2 weeks ago
- Browser-based NWB visualization and DANDI exploration☆59Updated last week