The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc.
☆14Feb 11, 2026Updated 4 months ago
Alternatives and similar repositories for p2rank-framework
Users that are interested in p2rank-framework are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Web application for protein-ligand binding sites analysis and visualization☆20Dec 27, 2025Updated 5 months ago
- Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz☆19Jun 14, 2024Updated last year
- ☆35Dec 15, 2023Updated 2 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- EViS: an Enhanced Virtual Screening Approach based on Pocket Ligand Similarity☆14Dec 7, 2021Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Equivariant Scalar Fields for Molecular Docking with Fast Fourier Transforms☆31Dec 8, 2023Updated 2 years ago
- Coarse-grained and Multi-dimensional Data-driven molecular generation (CMD-GEN). This framework bridges three-dimensional ligand-protein …☆17Sep 13, 2025Updated 8 months ago
- ☆22Sep 24, 2022Updated 3 years ago
- ☆22Oct 2, 2024Updated last year
- ☆21Oct 31, 2024Updated last year
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26May 22, 2025Updated last year
- [MGE Advances 2025] Offical implement of BgoFace☆19May 12, 2026Updated 3 weeks ago
- A novel method that quantitatively evaluates the impact of PLM in PLI predictions.☆12Sep 14, 2023Updated 2 years ago
- ☆13Jul 5, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Interaction profile extraction, scoring, alignment and evaluation of ShEPhERD. [ICLR 2025]☆38Apr 14, 2026Updated last month
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated 11 months ago
- ☆11Oct 1, 2021Updated 4 years ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated last year
- Official repository for the ProteinDJ protein design pipeline☆119Mar 26, 2026Updated 2 months ago
- ☆13Jun 7, 2024Updated 2 years ago
- ☆15Apr 14, 2023Updated 3 years ago
- The official open-source repository for AutoMolDesigner, an easy-to-use Python application dedicated to automated molecular design.☆31Mar 14, 2026Updated 2 months ago
- FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook☆19Jun 10, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- SE(3) diffusion models for generating CDR loops☆10Feb 6, 2024Updated 2 years ago
- ☆22Mar 25, 2025Updated last year
- Data set of protein-ligand complexes with reliable experimental structures and affinities☆45Oct 2, 2025Updated 8 months ago
- Web-tool for calculating and visualizing hydrophobic protrusions☆11Feb 22, 2022Updated 4 years ago
- ☆42Jul 8, 2023Updated 2 years ago
- ☆20Jul 3, 2024Updated last year
- ☆42Mar 26, 2025Updated last year
- few-shot compound activity regression☆12Aug 19, 2024Updated last year
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆22Feb 11, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Oct 2, 2024Updated last year
- Datasets for P2Rank project. https://github.com/rdk/p2rank☆30Nov 8, 2024Updated last year
- ☆21May 28, 2025Updated last year
- ☆13Apr 4, 2025Updated last year
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆36Aug 17, 2023Updated 2 years ago
- Code for running BinderFlow☆66Nov 21, 2025Updated 6 months ago
- Tailoring Molecules for Protein Pockets: a Transformer-based Generative Solution for Structured-based Drug Design☆20Jul 26, 2023Updated 2 years ago