Alternatives and similar repositories for p2rank-framework:

Users that are interested in p2rank-framework are comparing it to the libraries listed below

• cusbg / prankweb
  Web application for protein-ligand binding sites analysis and visualization
  ☆12Updated 2 weeks ago
• pablo-arantes / Cloud-Bind
  Cloud-based Drug Binding Structure Prediction
  ☆37Updated last month
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆25Updated 6 months ago
• rdk / p2rank-datasets
  Datasets for P2Rank project. https://github.com/rdk/p2rank
  ☆19Updated 5 months ago
• ld139 / ApoDock_public
  Code for ApoDock
  ☆21Updated 2 weeks ago
• BIMSBbioinfo / CompassDock
  Official Implementation of CompassDock
  ☆18Updated 6 months ago
• BrooksResearchGroup-UM / FASTDock
  FASTDock: A Pipeline for Allosteric Drug Discovery - example scripts and jupyter notebook
  ☆18Updated last year
• MooersLab / EasyPyMOL
  Script to facilitate the making of horizontal scripts
  ☆16Updated 11 months ago
• concept-lab / SiteFerret
  Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest
  ☆12Updated 2 years ago
• AspirinCode / GENiPPI
  Interface-aware molecular generative framework for protein-protein interaction modulators
  ☆12Updated 4 months ago
• genki-kudo / Pocket-to-Concavity
  Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres
  ☆16Updated 6 months ago
• taoshen99 / AutoMolDesigner
  The official open-source repository for AutoMolDesigner, an easy-to-use Python application dedicated to automated molecular design.
  ☆25Updated last year
• coleygroup / shepherd-score
  Interaction profile extraction, scoring, alignment and evaluation of ShEPhERD. [ICLR 2025]
  ☆21Updated 2 months ago
• ljmartin / dockviz
  docking visualization with py3dmol and streamlit
  ☆23Updated 4 years ago
• FatimaNoor74 / VirtuDockDL
  ☆16Updated 6 months ago
• rareylab / InteractionDrawer
  InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.
  ☆20Updated last year
• ohuelab / QEPPI
  Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions
  ☆18Updated last year
• NiBoyang / AutoDock-SS
  Use AutoDock for Ligand-based Virtual Screening
  ☆21Updated 8 months ago
• fsatool / fsatool.github.io
  A fast sampling and analysis tool for biomolecules
  ☆16Updated 3 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated 2 months ago
• broadinstitute / DEL-ML-Refactor
  ☆11Updated 3 weeks ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆31Updated last month
• dfhahn / protein-ligand-benchmark-analysis
  ☆21Updated last year
• PDBeurope / protein-cluster-conformers
  Clusters protein chains based on CA distance difference
  ☆14Updated 2 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆21Updated last month
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆11Updated last year
• mehdikariim / DockCADD-v2
  DockCADD An automated computational framework for molecular docking
  ☆13Updated last month
• meyresearch / BALM
  Learning Binding Affinities via Fine-tuning of Protein and Ligand Language Models
  ☆26Updated 4 months ago
• dkoes / show_contacts
  PyMOL Plugin for displaying polar contacts
  ☆17Updated 6 years ago