Nextflow-powered MS-DIAL
☆11Jan 13, 2025Updated last year
Alternatives and similar repositories for nextflow4ms-dial
Users that are interested in nextflow4ms-dial are comparing it to the libraries listed below
Sorting:
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 6 months ago
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- ☆12Jan 16, 2025Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Dec 5, 2025Updated 2 months ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- ☆16Feb 20, 2026Updated last week
- asari, metabolomics data preprocessing☆59Jan 29, 2026Updated last month
- Realtime quality control for mass spectrometry data acquisition☆21Nov 17, 2025Updated 3 months ago
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- ☆24Feb 24, 2026Updated last week
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- ☆11Nov 30, 2024Updated last year
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆25Jun 3, 2025Updated 9 months ago
- ☆11Feb 5, 2024Updated 2 years ago
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Mar 7, 2020Updated 5 years ago
- ☆17Apr 19, 2021Updated 4 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆31Jan 5, 2025Updated last year
- ☆28Nov 30, 2023Updated 2 years ago
- Fast and Accurate CE-, GC- and LC-MS(/MS) Data Processing☆52Feb 22, 2023Updated 3 years ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- ☆11Feb 20, 2026Updated last week
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated last month
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆13Nov 21, 2025Updated 3 months ago
- R Interface to the ClassyFire REST API☆12Feb 21, 2025Updated last year
- Repo hosting the MetFrag website☆10Jan 24, 2025Updated last year
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- Create .mzML files through the R Console☆12Aug 27, 2025Updated 6 months ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Updated this week
- Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks☆14Jan 11, 2021Updated 5 years ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- Spectral entropy for mass spectrometry data.☆36Dec 25, 2025Updated 2 months ago
- OpenAPI based libraries for different programming languages like R and Python☆19Feb 19, 2026Updated last week
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Feb 11, 2022Updated 4 years ago
- ☆14May 7, 2019Updated 6 years ago