Fill holes in binary 2D & 3D images fast.
☆29Apr 29, 2026Updated 2 months ago
Alternatives and similar repositories for fill_voids
Users that are interested in fill_voids are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Jun 11, 2026Updated 3 weeks ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Apr 18, 2026Updated 2 months ago
- Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes☆88Nov 5, 2025Updated 8 months ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries …☆455Jun 17, 2026Updated 3 weeks ago
- Code for the SIGGRAPH 2017 paper "Convolutional Neural Networks on Surfaces via Seamless Toric Covers"☆22Feb 7, 2019Updated 7 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Jan 24, 2017Updated 9 years ago
- VIGRA2 based on xtensor☆10Apr 4, 2018Updated 8 years ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithms☆25Nov 23, 2021Updated 4 years ago
- The Shape of Data: Intrinsic Distance for Comparing Data Distributions☆12Sep 25, 2019Updated 6 years ago
- PyTorch examples powered by Lightning☆11Dec 28, 2022Updated 3 years ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆14Oct 15, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆74May 18, 2026Updated last month
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated last week
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆13Sep 7, 2021Updated 4 years ago
- WebGL-based viewer for volumetric data☆25Jun 12, 2026Updated 3 weeks ago
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- Mesh generation from sparse matrices☆23Updated this week
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 2 months ago
- ☆10Apr 23, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Different scenarios (one per branch) to test different build configs on production☆20Jun 22, 2026Updated 2 weeks ago
- Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.☆266Updated this week
- SCIFIO ImageIO plugin for ITK☆16Apr 23, 2026Updated 2 months ago
- A Python module for accessing Hamamatsu DCIMG files☆14Jun 28, 2023Updated 3 years ago
- Image transformation, compression, and decompression codecs.☆182Jun 28, 2026Updated last week
- Fast Registration Of image Groups☆14Apr 2, 2026Updated 3 months ago
- Code for Paper Predicting Osteoarthritis Progression via Unsupervised Adversarial Representation Learning☆14Aug 11, 2022Updated 3 years ago
- UC Davis 2021 Senior Design Project: This Web-based liver segmentation app provides all the standard features of a medical image viewer a…☆12Jun 2, 2021Updated 5 years ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Jul 1, 2026Updated last week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Tensorflow Implementation for paper "self-supervised generative adversarial networks"☆38Sep 9, 2020Updated 5 years ago
- An open source image processing library☆20Jan 14, 2026Updated 5 months ago
- An open-source framework for optimizing binary image processing algorithms.☆16Feb 25, 2021Updated 5 years ago
- Add placeholders to your MkDocs pages☆21May 31, 2026Updated last month
- This page is for A Survey on Deep Learning of Small Sample in Biomedical Image Analysis.☆28Apr 17, 2020Updated 6 years ago
- Automated quantification of fibrous networks☆13Mar 10, 2026Updated 3 months ago
- Test pytorch code with minimal computational overhead☆26Jun 8, 2023Updated 3 years ago