seung-lab / dijkstra3dLinks
Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes
☆83Updated last month
Alternatives and similar repositories for dijkstra3d
Users that are interested in dijkstra3d are comparing it to the libraries listed below
Sorting:
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆179Updated 3 weeks ago
- ☆32Updated 5 years ago
- Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.☆260Updated last week
- 3D Image Skeletonization Tools☆37Updated 2 years ago
- Voxel2Mesh: 3D Mesh Model Generation from Volumetric Data☆181Updated 2 years ago
- ShapeWorks☆123Updated this week
- An interactive software to extract vessel centerline☆65Updated 4 years ago
- 2d and 3d distance transform based skeletonization☆24Updated 2 years ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆68Updated 2 months ago
- An implementation of morphological contour interpolation☆34Updated 3 weeks ago
- Interactive registration tool for 3D medical datasets☆33Updated last year
- MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning☆47Updated 6 years ago
- Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the Universit…☆116Updated 2 years ago
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆114Updated this week
- Ranking Operator Response of Path Openings☆29Updated last week
- Official SuperElastix repository☆88Updated 6 years ago
- A curve skeletonization method for elongated objects that may be noisy, IEEE WACV paper, Aug. 2018 update.☆11Updated last year
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Updated last month
- MITK - Generate Models (MITK-GEM) is a free open-source software pipeline to generate finite element models from image data.☆42Updated 4 years ago
- Volume Renderer with VTK☆85Updated 2 months ago
- The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core librarie…☆199Updated 9 months ago
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆33Updated last year
- 3D graph cut segmentation☆89Updated 4 years ago
- Standalone marching cubes implementation and Python bindings☆99Updated 2 weeks ago
- Analogue of the scale-invariant feature transform (SIFT) for three-dimensional images. Includes an image processing and linear algebra li…☆145Updated 5 years ago
- C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.☆43Updated 8 years ago
- Automating Model Generation For Image-Based Cardiac Flow Simulation☆14Updated 6 months ago
- Cylindrical Shape Decomposition☆16Updated 3 years ago
- Vessel and tube centerline extraction☆34Updated 3 weeks ago
- An ITK module to compute 3D thickness☆42Updated 3 weeks ago