Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes
☆86Nov 5, 2025Updated 6 months ago
Alternatives and similar repositories for dijkstra3d
Users that are interested in dijkstra3d are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆202May 18, 2026Updated last week
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Mar 6, 2026Updated 2 months ago
- Fill holes in binary 2D & 3D images fast.☆29Apr 29, 2026Updated 3 weeks ago
- Code and performance tests to demonstrate the COUNTLESS algorithm. https://medium.com/@willsilversmith/countless-high-performance-2x-down…☆10Oct 23, 2019Updated 6 years ago
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆65Apr 28, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated last month
- Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries …☆452May 5, 2026Updated 3 weeks ago
- Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing, Hole Filling.☆19Apr 18, 2026Updated last month
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆72May 18, 2026Updated last week
- Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.☆265Mar 18, 2026Updated 2 months ago
- Command line tool for registration of very large 3D volumes.☆16Jan 28, 2026Updated 3 months ago
- Compose chunk operators to create a pipeline for local or distributed petabyte-scale computation☆54Jun 20, 2025Updated 11 months ago
- ☆12Updated this week
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆12Sep 7, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Digitally recconstructed radiograph☆26Jul 6, 2020Updated 5 years ago
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- Cylindrical Shape Decomposition☆16Dec 8, 2022Updated 3 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆67May 16, 2026Updated last week
- Code for the MICCAI 2019 paper Balsiger et al., Learning Shape Representation on Sparse Point Clouds for Volumetric Image Segmentation☆19Nov 22, 2022Updated 3 years ago
- Web based Image Viewer developed @ Center for Advanced Imaging [University of Queensland]☆19May 18, 2023Updated 3 years ago
- Python wrapper for Google's Draco mesh compression library.☆120Mar 12, 2026Updated 2 months ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Jan 11, 2022Updated 4 years ago
- ☀️ Python 2.7 & Python 3.5 + NumPy Path Tracer☆12Jul 28, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆19Dec 28, 2016Updated 9 years ago
- GPU-accelerated image processing using CLIJ via pyimagej in python☆10Jan 8, 2021Updated 5 years ago
- Read and write Neuroglancer datasets programmatically.☆173Apr 24, 2026Updated last month
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆36May 19, 2026Updated last week
- ☆13Apr 27, 2020Updated 6 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated 4 months ago
- ☆12Sep 19, 2020Updated 5 years ago
- A software for fast segmentation and centerline extraction of tubular structures (e.g. blood vessels and airways) from different modaliti…☆96Feb 6, 2015Updated 11 years ago
- dual quaternion for 3d geometric operations☆31Sep 13, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- code for storing neurodata images and image annotations☆37Oct 1, 2017Updated 8 years ago
- ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy☆55Apr 29, 2026Updated 3 weeks ago
- ☆41Feb 26, 2021Updated 5 years ago
- A 3D level set method, based on a paper for X-Ray CT segmentation of root systems in WACV 2018.☆25Jul 29, 2019Updated 6 years ago
- StarDist plugin for napari☆39Aug 24, 2024Updated last year
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆27May 20, 2026Updated last week
- Software package for neuron reconstruction and visualization☆40May 27, 2025Updated 11 months ago