Alternatives and similar repositories for dcm2niix

Users that are interested in dcm2niix are comparing it to the libraries listed below

• icometrix / dicom2nifti
  ☆365Updated 3 weeks ago
• ANTsX / ANTsPy
  A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
  ☆742Updated this week
• ANTsX / ANTs
  Advanced Normalization Tools (ANTs)
  ☆1,328Updated this week
• MIC-DKFZ / HD-BET
  MRI brain extraction tool
  ☆341Updated 6 months ago
• BBillot / SynthSeg
  Contrast-agnostic segmentation of MRI scans
  ☆470Updated 11 months ago
• freesurfer / freesurfer
  Neuroimaging analysis and visualization suite
  ☆696Updated this week
• QIICR / dcmqi
  dcmqi (DICOM for Quantitative Imaging) is a C++ library for conversion between imaging research formats and the standard DICOM representa…
  ☆261Updated last month
• nipy / nibabel
  Python package to access a cacophony of neuro-imaging file formats
  ☆713Updated last month
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆243Updated last year
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python
  ☆228Updated 2 weeks ago
• pyushkevich / itksnap
  ITK-SNAP medical image segmentation tool
  ☆368Updated this week
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆331Updated last month
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆317Updated this week
• Deep-MI / FastSurfer
  PyTorch implementation of FastSurferCNN
  ☆527Updated last week
• niivue / niivue
  a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.
  ☆352Updated this week
• SuperElastix / elastix
  Official elastix repository
  ☆528Updated last week
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆586Updated this week
• AIM-Harvard / pyradiomics
  Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.sl…
  ☆1,276Updated 3 weeks ago
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆295Updated 2 years ago
• jcreinhold / intensity-normalization
  normalize the intensities of various MR image modalities
  ☆327Updated 5 months ago
• FrancescoLR / MS-lesion-segmentation
  ☆10Updated 3 years ago
• ENHANCE-PET / MOOSE
  MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…
  ☆250Updated last week
• lassoan / SlicerTotalSegmentator
  Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model
  ☆220Updated 2 weeks ago
• pyplati / platipy
  Processing Library and Analysis Toolkit for Medical Imaging in Python
  ☆132Updated last month
• qurit / rt-utils
  A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.
  ☆235Updated 3 months ago
• SuperElastix / SimpleElastix
  Multi-lingual medical image registration library
  ☆524Updated 2 years ago
• InsightSoftwareConsortium / SimpleITK-Notebooks
  Jupyter notebooks for learning how to use SimpleITK
  ☆865Updated last month
• CompImg / LST-AI
  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation
  ☆35Updated 3 months ago
• adamkwolf / 3d-nii-visualizer
  A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5
  ☆181Updated 11 months ago
• loli / medpy
  Medical image processing in Python
  ☆602Updated 10 months ago