Tool for robust segmentation of >100 important anatomical structures in CT and MR images
☆3,098Oct 22, 2026Updated last week
Alternatives and similar repositories for TotalSegmentator
Users that are interested in TotalSegmentator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆286Jul 21, 2026Updated 3 months ago
- ☆8,994Oct 22, 2026Updated last week
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆521Updated this week
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆352Jul 14, 2026Updated 3 months ago
- Segment Anything in Medical Images☆4,431May 7, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- AI Toolkit for Healthcare Imaging☆8,814Updated this week
- [ICLR 2024 oral; top 1.2%] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)☆433Oct 1, 2026Updated 3 weeks ago
- MONAI Tutorials☆2,579Updated this week
- ☆164Sep 11, 2026Updated last month
- [Nature 2026] Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured …☆502Sep 24, 2026Updated last month
- SAM-Med3D: An Efficient General-purpose Promptable Segmentation Model for 3D Volumetric Medical Image☆972Sep 21, 2025Updated last year
- nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without ma…☆664Oct 8, 2026Updated 3 weeks ago
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆312Aug 25, 2026Updated 2 months ago
- Medical imaging processing for AI applications.☆2,452Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Free-Text Promptable Universal 3D Medical Image Segmentation☆283Oct 10, 2026Updated 2 weeks ago
- The official code for "SegVol: Universal and Interactive Volumetric Medical Image Segmentation".☆392Jan 11, 2026Updated 9 months ago
- [ICCV 2023] CLIP-Driven Universal Model; Rank first in MSD Competition.☆679Oct 24, 2025Updated last year
- Automated lung segmentation in CT☆797Updated this week
- The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up un…☆373Sep 3, 2024Updated 2 years ago
- MONAI Label is an intelligent open source image labeling and learning tool.☆908Updated this week
- [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.☆537Nov 2, 2024Updated last year
- [npj Digital Medicine] The official repository for "Large-Vocabulary Segmentation for Medical Images with Text Prompts"☆311Dec 29, 2025Updated 10 months ago
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆129Apr 18, 2026Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MONAI Versatile Imaging Segmentation and Annotation☆299Oct 6, 2026Updated 3 weeks ago
- SOTA medical image segmentation methods based on various challenges☆1,680Dec 12, 2023Updated 2 years ago
- Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.sl…☆1,467Oct 27, 2025Updated last year
- The official code for "Towards Generalist Foundation Model for Radiology by Leveraging Web-scale 2D&3D Medical Data".☆571Jul 25, 2025Updated last year
- 🩻 Whole-body CT segmentation made simple: 22,022 scans, 167 structures, one open solution.☆89Sep 17, 2026Updated last month
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,207Updated this week
- A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.☆258Sep 30, 2026Updated last month
- MedSAM2: Segment Anything in 3D Medical Images and Videos☆733Jul 11, 2025Updated last year
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆158Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Unsupervised Learning for Image Registration☆2,754Sep 11, 2026Updated last month
- Contrast-agnostic segmentation of MRI scans☆587Jul 17, 2024Updated 2 years ago
- M3D: Advancing 3D Medical Image Analysis with Multi-Modal Large Language Models☆469Apr 13, 2025Updated last year
- Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography☆429Jul 18, 2025Updated last year
- ☆403Jun 23, 2025Updated last year
- BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Comp…☆81Oct 13, 2026Updated 2 weeks ago
- Computed tomography to body composition (Comp2Comp).☆129Jan 6, 2026Updated 9 months ago