Tool for robust segmentation of >100 important anatomical structures in CT and MR images
☆2,699May 13, 2026Updated last week
Alternatives and similar repositories for TotalSegmentator
Users that are interested in TotalSegmentator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fully automatic total body segmentation in 3D Slicer using "TotalSegmentator" AI model☆259May 7, 2026Updated 2 weeks ago
- ☆8,417May 13, 2026Updated last week
- MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemi…☆326Updated this week
- Segment Anything in Medical Images☆4,267May 7, 2025Updated last year
- ☆155Dec 17, 2025Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MONAI Tutorials☆2,460May 5, 2026Updated 2 weeks ago
- [ICLR 2024 oral; top 1.2%] Supervised Pre-Trained 3D Models for Medical Image Analysis (9,262 CT volumes + 25 annotated classes)☆416Jan 13, 2026Updated 4 months ago
- nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without ma…☆641Oct 27, 2025Updated 6 months ago
- AI Toolkit for Healthcare Imaging☆8,186Updated this week
- nnInteractive is a framework for 3D interactive segmentation, supporting intuitive prompts like points, scribbles, bounding boxes, and la…☆397May 11, 2026Updated last week
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆303Nov 24, 2025Updated 5 months ago
- SAM-Med3D: An Efficient General-purpose Promptable Segmentation Model for 3D Volumetric Medical Image☆909Sep 21, 2025Updated 8 months ago
- MONAI Label is an intelligent open source image labeling and learning tool.☆847Apr 6, 2026Updated last month
- The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations), up un…☆369Sep 3, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [ICCV 2023] CLIP-Driven Universal Model; Rank first in MSD Competition.☆674Oct 24, 2025Updated 6 months ago
- Medical imaging processing for AI applications.☆2,394May 6, 2026Updated 2 weeks ago
- The official code for "SegVol: Universal and Interactive Volumetric Medical Image Segmentation".☆379Jan 11, 2026Updated 4 months ago
- [MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.☆506Nov 2, 2024Updated last year
- SOTA medical image segmentation methods based on various challenges☆1,673Dec 12, 2023Updated 2 years ago
- MONAI Versatile Imaging Segmentation and Annotation☆280Apr 13, 2026Updated last month
- A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.☆254Jul 20, 2025Updated 10 months ago
- Library to compute surface distance based performance metrics for segmentation tasks.☆597Feb 19, 2025Updated last year
- Extension for 3D Slicer for running MONAI Auto3DSeg models☆123Apr 18, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆400Jun 23, 2025Updated 10 months ago
- Automated lung segmentation in CT☆783May 3, 2026Updated 2 weeks ago
- Computed tomography to body composition (Comp2Comp).☆115Jan 6, 2026Updated 4 months ago
- The official repository of "AbdomenCT-1K: Is Abdominal Organ Segmentation A Solved Problem?"☆266Nov 26, 2023Updated 2 years ago
- Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.sl…☆1,415Oct 27, 2025Updated 6 months ago
- Unsupervised Learning for Image Registration☆2,718Apr 26, 2026Updated 3 weeks ago
- [MICCAI2024&RedJournal2026] Is deep learning ready for abdominal organ-at-risk segmentation in the foundation model era: A comprehensive …☆61Jul 30, 2024Updated last year
- [npj Digital Medicine] The official repository for "Large-Vocabulary Segmentation for Medical Images with Text Prompts"☆296Dec 29, 2025Updated 4 months ago
- uniGradICON: A Foundation Model for Medical Image Registration (MICCAI 2024)☆222May 4, 2026Updated 2 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- The official code for "Towards Generalist Foundation Model for Radiology by Leveraging Web-scale 2D&3D Medical Data".☆544Jul 25, 2025Updated 9 months ago
- Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comp…☆261Updated this week
- Contrast-agnostic segmentation of MRI scans☆554Jul 17, 2024Updated last year
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆124Dec 23, 2024Updated last year
- High-level DICOM abstractions for the Python programming language☆224May 15, 2026Updated last week
- [NeurIPS 2024] Touchstone - Benchmarking AI on 5,172 o.o.d. CT volumes and 9 anatomical structures☆137Nov 24, 2025Updated 5 months ago
- RadImageNet, a pre-trained convolutional neural networks trained solely from medical imaging to be used as the basis of transfer learning…☆479May 15, 2024Updated 2 years ago