nipy / nibabelLinks
Python package to access a cacophony of neuro-imaging file formats
☆761Updated last week
Alternatives and similar repositories for nibabel
Users that are interested in nibabel are comparing it to the libraries listed below
Sorting:
- Workflows and interfaces for neuroimaging packages☆807Updated 3 months ago
- Neuroimaging analysis and visualization suite☆784Updated this week
- DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…☆799Updated last week
- A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.☆830Updated 2 weeks ago
- Neuroimaging in Python FMRI analysis package☆407Updated last year
- ☆391Updated 7 months ago
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,111Updated 3 months ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆346Updated 2 weeks ago
- Advanced Normalization Tools (ANTs)☆1,421Updated this week
- Automatic White Matter Bundle Segmentation☆253Updated 2 years ago
- Processing pipelines for the HCP☆631Updated this week
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆336Updated last week
- Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)☆247Updated this week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆712Updated last week
- Comprehensive and open-source library of analysis tools for MRI of the spinal cord.☆254Updated this week
- Software platform for clinical neuroimaging studies☆268Updated this week
- PyTorch implementation of FastSurferCNN☆579Updated last week
- A framework for developing neural network models for 3D image processing.☆167Updated 3 weeks ago
- Curated list of open-access databases with human structural MRI data☆129Updated 6 years ago
- Contrast-agnostic segmentation of MRI scans☆531Updated last year
- Medical image processing in Python☆615Updated last year
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Updated 2 weeks ago
- Flexible DICOM conversion into structured directory layouts☆273Updated 3 weeks ago
- MRI brain extraction tool☆395Updated last year
- A project to provide custom sorting and renaming of dicom files☆85Updated 9 months ago
- Multi-lingual medical image registration library☆537Updated 2 years ago
- Simple pure-python module for reading and writing nrrd files.☆124Updated last year
- Generate custom Docker and Singularity images, and minimize existing containers☆356Updated last week
- Cortical neuroimaging visualization in Python☆252Updated 2 years ago
- A deep learning python package for neuroimaging data. Made by:☆129Updated 5 years ago