Alternatives and similar repositories for nibabel:

Users that are interested in nibabel are comparing it to the libraries listed below

• nipy / nipype
  Workflows and interfaces for neuroimaging packages
  ☆779Updated last month
• ANTsX / ANTsPy
  A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
  ☆702Updated this week
• freesurfer / freesurfer
  Neuroimaging analysis and visualization suite
  ☆669Updated this week
• nipy / nipy
  Neuroimaging in Python FMRI analysis package
  ☆389Updated 4 months ago
• rordenlab / dcm2niix
  dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
  ☆956Updated 2 weeks ago
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆316Updated last week
• icometrix / dicom2nifti
  ☆360Updated last month
• ANTsX / ANTs
  Advanced Normalization Tools (ANTs)
  ☆1,292Updated this week
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆309Updated last week
• nipreps / fmriprep
  fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…
  ☆665Updated last month
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆570Updated this week
• aramis-lab / clinica
  Software platform for clinical neuroimaging studies
  ☆248Updated 2 weeks ago
• InsightSoftwareConsortium / SimpleITK-Notebooks
  Jupyter notebooks for learning how to use SimpleITK
  ☆862Updated this week
• dipy / dipy
  DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…
  ☆755Updated this week
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆238Updated last year
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆252Updated last month
• SimpleITK / SimpleITK
  SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, educati…
  ☆948Updated this week
• MIC-DKFZ / HD-BET
  MRI brain extraction tool
  ☆329Updated 4 months ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python
  ☆214Updated this week
• BBillot / SynthSeg
  Contrast-agnostic segmentation of MRI scans
  ☆437Updated 9 months ago
• loli / medpy
  Medical image processing in Python
  ☆597Updated 7 months ago
• ReproNim / neurodocker
  Generate custom Docker and Singularity images, and minimize existing containers
  ☆338Updated last week
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆289Updated last year
• Deep-MI / FastSurfer
  PyTorch implementation of FastSurferCNN
  ☆508Updated last week
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆235Updated last month
• SuperElastix / SimpleElastix
  Multi-lingual medical image registration library
  ☆522Updated last year
• SuperElastix / elastix
  Official elastix repository
  ☆519Updated this week
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆140Updated last month
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆174Updated 3 weeks ago
• jcreinhold / intensity-normalization
  normalize the intensities of various MR image modalities
  ☆325Updated 3 months ago