Alternatives and similar repositories for ComBatHarmonization:

Users that are interested in ComBatHarmonization are comparing it to the libraries listed below

• Jfortin1 / neuroCombat
  Harmonization of multi-site imaging data with ComBat (Python)
  ☆133Updated last year
• ha-ha-ha-han / UKBiobank_deep_pretrain
  Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.
  ☆149Updated 5 months ago
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆90Updated this week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆152Updated 3 weeks ago
• MIDIconsortium / BrainAge
  ☆32Updated 7 months ago
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆233Updated last year
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆172Updated 2 months ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆72Updated 2 months ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆139Updated 2 weeks ago
• vishnubashyam / DeepBrainNet
  Convolutional Neural Network trained for age prediction using a large (n=11,729) set of MRI scans from a highly diversified cohort spanni…
  ☆48Updated 4 years ago
• CompImg / LST-AI
  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation
  ☆29Updated 3 months ago
• ucl-pond / pySuStaIn
  Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.
  ☆154Updated 2 months ago
• BBillot / SynthSR
  A framework for joint super-resolution and image synthesis, without requiring real training data
  ☆157Updated 11 months ago
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆314Updated last month
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆67Updated 8 months ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆47Updated this week
• AthenaEPI / dmipy
  The open source toolbox for reproducible diffusion MRI-based microstructure estimation
  ☆105Updated 3 months ago
• james-cole / brainageR
  Software for generating a brain-predicted age value, using Gaussian Processes regression, implemented in R
  ☆82Updated last year
• Jfortin1 / MNITemplate
  MNI152 Template
  ☆40Updated 4 years ago
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆45Updated 3 weeks ago
• CBICA / NiChart_Project
  Neuro Imaging Chart of AI-based Imaging Biomarkers
  ☆17Updated this week
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 4 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆65Updated this week
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆47Updated 7 months ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python
  ☆211Updated last week
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆108Updated 2 months ago
• andrewjahn / AndysBrainBook
  This repository contains the files that generate Andy's Brain Book on ReadTheDocs.
  ☆189Updated this week
• benniatli / BrainAgePredictionResNet
  3D residual neural network that predicts age based on brain MRI images (implemented using TensorFlow 2).
  ☆63Updated 3 years ago
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆95Updated 7 months ago
• MIC-DKFZ / radtract
  RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.
  ☆11Updated 8 months ago