Alternatives and similar repositories for bidskit

Users that are interested in bidskit are comparing it to the libraries listed below

• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 7 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆56Updated last year
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆35Updated 7 months ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 7 months ago
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated last month
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆66Updated 8 months ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆36Updated 3 months ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆83Updated last month
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆39Updated 2 years ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆49Updated this week
• koenhaak / congrads
  Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…
  ☆37Updated 7 years ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆34Updated 6 years ago
• preprocessed-connectomes-project / quality-assessment-protocol
  Scripts and documentation for the PCP's protocol for assessing data quality.
  ☆41Updated 3 years ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆30Updated last year
• dorianps / LESYMAP
  Lesion to Symptom Mapping in R
  ☆33Updated last year
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆94Updated this week
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆25Updated last year
• CMRR-C2P / MB
  Support for CMRR multi-band pulse sequences
  ☆58Updated 3 months ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆104Updated 8 months ago
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆36Updated last week
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆42Updated last year
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆97Updated last year
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆52Updated 2 months ago
• yetianmed / subcortex
  ☆121Updated 2 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 7 months ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated last year
• NeuroanatomyAndConnectivity / gradient_analysis
  ☆94Updated 7 years ago