de Bruijn graph construction tool
☆19Apr 26, 2015Updated 11 years ago
Alternatives and similar repositories for debruijn
Users that are interested in debruijn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- de Bruijn CompAction in Low Memory☆23Jan 15, 2016Updated 10 years ago
- Python implementation of the BCALM algorithm☆15Dec 2, 2016Updated 9 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 7 years ago
- TeaTime: TLS Estimates Accurate Timing Information More Entropically☆15Oct 31, 2011Updated 14 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Apr 25, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- autoscan - automatic fingerprint of visited networks☆11Nov 2, 2013Updated 12 years ago
- Build docker container for @MaskRay's pcap-search☆11Oct 19, 2018Updated 7 years ago
- BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented…☆12May 9, 2013Updated 13 years ago
- writeup of some ctf challs☆11Apr 20, 2025Updated last year
- first test 3D fluid Openframeworks☆13Feb 4, 2015Updated 11 years ago
- GLSL test Ray Tracing openframeworks☆10Dec 11, 2014Updated 11 years ago
- User Space NVMe Driver (modified for use on Zynq UltraScale+ MPSoC)☆11Sep 26, 2018Updated 8 years ago
- VisualTracker is an open source modular sequencer with graphical user interface written for Pure Data☆12Nov 30, 2015Updated 10 years ago
- A collection for some scripts I used in CTF.☆15Apr 4, 2018Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Sep 7, 2022Updated 4 years ago
- ☆13May 23, 2018Updated 8 years ago
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated last year
- focal loss (multi-class) for lightgbm/xgboost☆12Apr 18, 2021Updated 5 years ago
- Pulled out Linux kernel code to run in userland so they could be targeted by AFL and KLEE☆20Jan 29, 2020Updated 6 years ago
- Code from zlib.net project☆12Feb 25, 2026Updated 7 months ago
- Pipelines for re-analysis of iCLIP and scRNA-Seq data for UMI-tools publication☆11Jun 13, 2022Updated 4 years ago
- This is a authority management project.☆10Dec 18, 2020Updated 5 years ago
- KDTree implementation for fast nearest-neighbor search on variable-sized points, based on nanoflann☆13Feb 10, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- EnsembleAssembler performs de novo assembly of pathogen genomes from metagenomic samples sequenced using Illumina platforms☆10Nov 30, 2014Updated 11 years ago
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆16Updated this week
- Species-aware DNA language models capture regulatory elements and their evolution☆28Aug 21, 2023Updated 3 years ago
- Poisson Disk Sampling for openFrameworks.☆13Jun 21, 2017Updated 9 years ago
- a survey about light installation in public☆15Sep 15, 2018Updated 8 years ago
- Docker image that generates a 800x600 weather status page for display on Nook Simple Touch☆11Jan 1, 2023Updated 3 years ago
- A method to identify structural variation from sequencing data in target regions☆32Sep 23, 2020Updated 6 years ago
- a Audio Unit library for openFrameworks☆14Apr 10, 2012Updated 14 years ago
- A parallel version of ofxTSNE.☆16Apr 10, 2019Updated 7 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆55Jan 3, 2024Updated 2 years ago
- ☆16Dec 22, 2019Updated 6 years ago
- Web app created to collect audios for course project☆10Apr 6, 2018Updated 8 years ago
- Xray Image Classifier in collaboration with Chulalongkorn University Computational Molecular Biology Research Group☆12Aug 18, 2020Updated 6 years ago
- collection of data structures and algorithms☆19Mar 19, 2019Updated 7 years ago
- A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.☆44Aug 21, 2025Updated last year
- My Pd (pure data) patches, abstractions, and extensions.☆20Jan 24, 2023Updated 3 years ago