de Bruijn graph construction tool
☆19Apr 26, 2015Updated 11 years ago
Alternatives and similar repositories for debruijn
Users that are interested in debruijn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- de Bruijn CompAction in Low Memory☆23Jan 15, 2016Updated 10 years ago
- Python implementation of the BCALM algorithm☆15Dec 2, 2016Updated 9 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 7 years ago
- TeaTime: TLS Estimates Accurate Timing Information More Entropically☆15Oct 31, 2011Updated 14 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Apr 25, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The repository keeps the files for an IPython notebook on about how to make a simple genome assembler using python☆30May 10, 2018Updated 8 years ago
- autoscan - automatic fingerprint of visited networks☆11Nov 2, 2013Updated 12 years ago
- Build docker container for @MaskRay's pcap-search☆12Oct 19, 2018Updated 7 years ago
- Self-similar visualization of many-body wavefunctions (and also: time series, DNA, proteins).☆13Aug 3, 2015Updated 11 years ago
- react-native OS X app + gl-react-native☆15Jan 31, 2016Updated 10 years ago
- writeup of some ctf challs☆11Apr 20, 2025Updated last year
- VisualTracker is an open source modular sequencer with graphical user interface written for Pure Data☆12Nov 30, 2015Updated 10 years ago
- A local realigner around InDels for MethylSeq data☆12Apr 28, 2016Updated 10 years ago
- A collection for some scripts I used in CTF.☆15Apr 4, 2018Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Sep 7, 2022Updated 3 years ago
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated last year
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆55Jan 3, 2024Updated 2 years ago
- focal loss (multi-class) for lightgbm/xgboost☆12Apr 18, 2021Updated 5 years ago
- Pulled out Linux kernel code to run in userland so they could be targeted by AFL and KLEE☆20Jan 29, 2020Updated 6 years ago
- This is a authority management project.☆10Dec 18, 2020Updated 5 years ago
- EnsembleAssembler performs de novo assembly of pathogen genomes from metagenomic samples sequenced using Illumina platforms☆10Nov 30, 2014Updated 11 years ago
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆15Oct 30, 2024Updated last year
- Docker image that generates a 800x600 weather status page for display on Nook Simple Touch☆11Jan 1, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A method to identify structural variation from sequencing data in target regions☆32Sep 23, 2020Updated 5 years ago
- Simple template library for CodeIgniter 3☆16Jun 10, 2017Updated 9 years ago
- A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.☆44Aug 21, 2025Updated 11 months ago
- Xray Image Classifier in collaboration with Chulalongkorn University Computational Molecular Biology Research Group☆12Aug 18, 2020Updated 6 years ago
- Example of using Backbone.js to display a movie list☆15Jan 19, 2012Updated 14 years ago
- For measuring distances between genetic programming trees, both syntactically and via operators.☆18Apr 9, 2017Updated 9 years ago
- ☆11Updated this week
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 11 months ago
- 《The Definitive Antlr 4 Reference》的中文翻译☆13Jul 1, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A peer2peer social network, written in go using 9p and tls☆17Dec 30, 2013Updated 12 years ago
- Capsule Networks and Convolutional Neural Networks for the Automated Segmentation of Left Atrium in Cardiac MRI☆23Dec 20, 2019Updated 6 years ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Dec 6, 2013Updated 12 years ago
- ☆16Jul 20, 2020Updated 6 years ago
- Example code for Build Your Own AJAX Web Applications book☆16Apr 29, 2013Updated 13 years ago
- Reverse engineering toolkit for exploit/malware analysis☆35May 10, 2020Updated 6 years ago
- Scoop by Rusty Foster and the CMF running Kuro5hin and other websites☆12Apr 14, 2017Updated 9 years ago