pzweuj / DNApipeline
通过配置文件实现一条命令完成常见DNA线的生信分析
☆8Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for DNApipeline
- Readme☆10Updated 4 years ago
- a bucket of bioinformatics scripts☆13Updated last week
- All kinds of NGS analysis pipeline☆12Updated 5 years ago
- lncRNA分析流程☆8Updated 6 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆15Updated last month
- lncRNA-screen☆26Updated 7 years ago
- Nextflow pipeline for BWA, BWA2 and STAR alignments☆12Updated 3 months ago
- do some exercise☆11Updated 5 months ago
- shared scripts in Lu Lab @ Tsinghua University☆11Updated 6 years ago
- scripts used for processing and analyzing data in the article.☆13Updated 5 years ago
- Awk, bash, python scripts for processing NGS data☆14Updated 9 years ago
- ☆17Updated 6 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 6 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆18Updated last year
- I often use some of the self-written programs.☆15Updated 7 months ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆24Updated 5 years ago
- ☆16Updated 3 months ago
- This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …☆25Updated 2 weeks ago
- ☆16Updated 3 years ago
- ☆14Updated 6 years ago
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic data☆16Updated 3 years ago
- ☆21Updated 2 years ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆17Updated last year
- Pipeline for structural variation detection in cohorts☆48Updated 3 years ago
- Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.☆9Updated 5 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆19Updated 7 years ago
- A comprehensive pipeline for RNAseq data analysis☆22Updated 2 months ago
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆14Updated 10 months ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Updated 4 years ago
- Linkage disequlibrium-informed PGT-A (LD-PGTA). A package for detecting genotypic signatures of aneuploidy from extremely low-coverage se…☆16Updated 2 years ago