eacooper400 / GWAS_PipelinesLinks
Instructions and helpful R code for Running GEMMA and GAPIT
☆13Updated 8 years ago
Alternatives and similar repositories for GWAS_Pipelines
Users that are interested in GWAS_Pipelines are comparing it to the libraries listed below
Sorting:
- Genomic Annotation in Livestock for positional candidate LOci☆13Updated 4 years ago
- Working on cotton resequencing☆11Updated 5 years ago
- scripts used for processing and analyzing data in the article.☆13Updated 6 years ago
- ☆15Updated 9 months ago
- Killifish genomics scripts☆12Updated 4 years ago
- https://filippob.github.io/introduction_to_gwas/☆21Updated 5 months ago
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆23Updated 2 years ago
- Example for TWAS☆12Updated 3 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆13Updated 2 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Updated 2 years ago
- a bucket of bioinformatics scripts☆13Updated last week
- the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics☆17Updated 3 years ago
- Course in population genomics at BiRC☆12Updated 7 months ago
- All kinds of NGS analysis pipeline☆12Updated 6 years ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Updated 4 years ago
- 3’ Tag RNA-seq pipeline (Work in progress)☆10Updated 4 years ago
- A tool to visualize the haplotype pattern and various information in excel.☆21Updated 9 months ago
- Readme☆10Updated 5 years ago
- The cattle Genotype-Tissue Expression atlas v1☆28Updated 2 years ago
- Suit of R-scripts to perform landscape genomic analyses☆13Updated 5 years ago
- ☆10Updated 4 years ago
- ☆12Updated 3 years ago
- Scripts for bioinformatics data processing and analysis☆12Updated 2 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆16Updated 3 months ago
- Pipelines for Drosophila genome assembly and analysis☆16Updated 3 years ago
- Scripts to convert between file formats for various analyses☆16Updated 7 months ago
- Direct RNA publication scripts☆11Updated 8 years ago
- Common scripts☆15Updated last month
- Some useful bioinformatics pipelines for genomics analysis☆14Updated 4 years ago