eacooper400 / GWAS_PipelinesLinks
Instructions and helpful R code for Running GEMMA and GAPIT
☆12Updated 7 years ago
Alternatives and similar repositories for GWAS_Pipelines
Users that are interested in GWAS_Pipelines are comparing it to the libraries listed below
Sorting:
- scripts used for processing and analyzing data in the article.☆13Updated 5 years ago
- ☆11Updated 2 years ago
- Working on cotton resequencing☆11Updated 5 years ago
- All kinds of NGS analysis pipeline☆12Updated 5 years ago
- shared scripts in Lu Lab @ Tsinghua University☆13Updated 6 years ago
- a bucket of bioinformatics scripts☆13Updated 2 weeks ago
- ☆14Updated 5 months ago
- The cattle Genotype-Tissue Expression atlas v1☆26Updated 2 years ago
- Pipeline for eukaryotic genome annotation based on external evidences☆13Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Updated 2 years ago
- Killifish genomics scripts☆12Updated 4 years ago
- ☆9Updated 8 months ago
- Repository for code used for publications☆28Updated 7 months ago
- GWAS analysis process based on EMMAX software☆12Updated last year
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Updated 3 years ago
- Readme☆10Updated 5 years ago
- ☆10Updated 3 years ago
- https://filippob.github.io/introduction_to_gwas/☆20Updated last month
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆21Updated 2 years ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Updated 4 years ago
- A tool to visualize the haplotype pattern and various information in excel.☆19Updated 5 months ago
- Direct RNA publication scripts☆11Updated 7 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆16Updated 10 months ago
- Common scripts☆14Updated last week
- 通过配置文件实现一条命令完成常见DNA线的生信分析☆8Updated 4 years ago
- Scripts to convert between file formats for various analyses☆17Updated 2 months ago
- ☆19Updated last year
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Updated 2 years ago
- 基因组组装注释流程及脚本☆16Updated 2 years ago
- ☆13Updated 2 years ago