Alternatives and similar repositories for drmaa-python

Users that are interested in drmaa-python are comparing it to the libraries listed below

• pygridtools / gridmap
  Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).
  ☆85Updated 2 years ago
• roryk / ipython-cluster-helper
  Tool to easily start up an IPython cluster on different schedulers.
  ☆146Updated 5 years ago
• cgat-developers / ruffus
  CGAT-ruffus is a lightweight python module for running computational pipelines
  ☆175Updated 4 years ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated last year
• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆30Updated 5 years ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 5 years ago
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• pycogent / pycogent
  PyCogent: Official repository for software and unit tests
  ☆92Updated 4 years ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆70Updated 5 years ago
• natefoo / slurm-drmaa
  DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm
  ☆48Updated last month
• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 9 years ago
• BioContainers / mulled
  Mulled - Automatized Containerized Software Repository
  ☆66Updated last year
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated 11 months ago
• dask / dask-drmaa
  Deploy Dask on DRMAA clusters
  ☆40Updated 4 years ago
• JetBrains-Research / snakecharm
  Plugin for PyCharm / IntelliJ IDEA Platform IDEs which adds support for Snakemake language.
  ☆62Updated 5 months ago
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• ga4gh / task-execution-schemas
  ☆93Updated 2 months ago
• singularityhub / singularityhub.github.io
  Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs
  ☆68Updated 3 years ago
• dib-lab / screed
  a simple read-only sequence database, designed for short reads
  ☆65Updated 2 years ago
• enasequence / cramtools
  CRAM format specification and java API for read data.
  ☆59Updated 7 years ago
• brentp / pyfasta
  fast, memory-efficient, pythonic (and command-line) access to fasta sequence files
  ☆86Updated 8 years ago
• saga-project / BigJob
  SAGA-based Pilot-Job Implementation for Compute and Data
  ☆19Updated 6 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated 2 months ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆87Updated last month
• sseemayer / qstat-pretty
  Pretty GridEngine, Torque and Platform LSF status tables
  ☆33Updated 9 years ago
• brentp / hts-python
  pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)
  ☆49Updated 8 years ago
• jdrudolph / goenrich
  GO enrichment with python -- pandas meets networkx
  ☆88Updated 5 years ago
• schlegelp / bioRxiv-LaTeX-template
  LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
  ☆20Updated 9 years ago
• LUMC / pytest-workflow
  Configure workflow/pipeline tests using yaml files.
  ☆70Updated last year