Alternatives and similar repositories for slurmpy

Users that are interested in slurmpy are comparing it to the libraries listed below

• pygridtools / drmaa-python
  Python wrapper around the C DRMAA library.
  ☆108Updated 6 years ago
• singularityhub / singularityhub.github.io
  Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs
  ☆69Updated 3 years ago
• lucapinello / bsub_jupyter
  Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…
  ☆20Updated 3 years ago
• troycomi / reportseff
  Tabular seff
  ☆86Updated last week
• roryk / ipython-cluster-helper
  Tool to easily start up an IPython cluster on different schedulers.
  ☆147Updated 5 years ago
• dask / dask-drmaa
  Deploy Dask on DRMAA clusters
  ☆40Updated 4 years ago
• statgen / SLURM-examples
  ☆94Updated 6 years ago
• snakemake / snakemake-executor-plugin-slurm
  A Snakemake executor plugin for submitting jobs to a SLURM cluster
  ☆41Updated last week
• acorg / slurm-pipeline
  A Python class for scheduling SLURM jobs
  ☆58Updated 11 months ago
• adrianveres / polo
  Python Optimal Leaf Ordering for Hierarchical Clustering
  ☆21Updated 8 years ago
• hpc-carpentry / hpc-python
  HPC Python lesson materials
  ☆61Updated 2 years ago
• sgkit-dev / bio2zarr
  Convert bioinformatics file formats to Zarr
  ☆38Updated 4 months ago
• WarrenWeckesser / heatmapcluster
  A python library for generating a clustered heatmap with dendrograms.
  ☆34Updated 3 years ago
• accre / SLURM
  SLURM Example Scripts
  ☆71Updated 6 years ago
• singularityhub / singularity-deploy
  Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client
  ☆17Updated last year
• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 8 years ago
• sgkit-dev / vcztools
  Partial reimplementation of bcftools for VCF Zarr
  ☆18Updated 3 months ago
• Snakemake-Profiles / slurm
  Cookiecutter for snakemake slurm profile
  ☆132Updated last year
• NERSC / slurm-magic
  IPython magic for SLURM.
  ☆69Updated 5 years ago
• higlass / scipy19
  Slides and demos from our SciPyConf 2019 talk
  ☆13Updated 4 years ago
• oicr-gsi / robust-paper
  Ten Simple Rules for Making Research Software More Robust. Manuscript is published at PLoS Computational Biology. Feedback is welcome!
  ☆12Updated 8 years ago
• kaczmarj / apptainer-in-docker
  Apptainer in Docker!
  ☆52Updated 10 months ago
• dask / dask-jobqueue
  Deploy Dask on job schedulers like PBS, SLURM, and SGE
  ☆250Updated 4 months ago
• pygridtools / gridmap
  Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).
  ☆84Updated 2 years ago
• snakemake / snakefmt
  The uncompromising Snakemake code formatter
  ☆176Updated last month
• phylovi / bito
  Python-interface C++ library for Bayesian phylogenetics via optimization
  ☆39Updated last year
• endrebak / poranges
  pyranges/bioframe for polars
  ☆18Updated 2 years ago
• schlegelp / bioRxiv-LaTeX-template
  LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
  ☆21Updated 9 years ago
• sampsyo / clusterfutures
  super-slick Slurm and Condor cluster execution for Python
  ☆25Updated last year
• jupyter-widgets-contrib / ipyigv
  A Jupyter wrapper for the igv.js library (representation of genomic data)
  ☆26Updated 4 years ago