Easily map Python functions onto a cluster using a DRMAA-compatible grid engine like Sun Grid Engine (SGE).
☆86Feb 27, 2023Updated 3 years ago
Alternatives and similar repositories for gridmap
Users that are interested in gridmap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python wrapper around the C DRMAA library.☆109Mar 16, 2019Updated 7 years ago
- High-level python wapper for the Sun Grid Engine (SGE) using DRMAA and ZMQ☆20Feb 17, 2014Updated 12 years ago
- A lightweight Python library for distributed computing on Sun Grid Engines☆21Oct 22, 2020Updated 5 years ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- UNMAINTAINED - USE AT YOUR OWN RISKS☆66Mar 16, 2013Updated 13 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reference implementation of the DRMAAv2 C Language Binding☆24Apr 5, 2013Updated 13 years ago
- Hardware Design, Exploration, and Code Generation for SoC Designers☆12Dec 15, 2019Updated 6 years ago
- Roslin is a reproducible and reusable workflow for Cancer Genomic Sequencing Analysis☆16Nov 13, 2024Updated last year
- Deploy Dask on DRMAA clusters☆40Feb 8, 2021Updated 5 years ago
- Add functional variant annotation to MAF file☆11Nov 20, 2024Updated last year
- ☆13Nov 20, 2015Updated 10 years ago
- JavaScript Sequence Alignment Viewer☆11Mar 25, 2022Updated 4 years ago
- ABRA2☆97Dec 2, 2022Updated 3 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python based pipeline management software for clusters (but checkout toil: https://github.com/BD2KGenomics/toil, its successor)☆24Sep 4, 2017Updated 8 years ago
- Concurrent appendable key-value storage☆108Jul 15, 2024Updated last year
- Disable virtualenv (>=14)'s downloading behaviour when running through tox.☆18May 17, 2019Updated 7 years ago
- TGS scaffolding☆47Nov 19, 2021Updated 4 years ago
- Python interface to the GenoLogics LIMS server via its REST API.☆30Aug 13, 2025Updated 9 months ago
- de Bruijn Workflow using Integral information of Short pair End reads☆13Aug 21, 2024Updated last year
- ☆10May 24, 2025Updated last year
- parse Grid Engine qstat job info list into a list of python dicts☆11May 19, 2022Updated 4 years ago
- Analysis of antibody NGS data☆13Mar 19, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Annotate genomics variations of hg19 by using a BED format database, which construct from NCBI annotation release 104☆19Aug 4, 2023Updated 2 years ago
- deploy Dask.distributed to GridEngine (sge/pbs) cluster systems☆21Jan 11, 2017Updated 9 years ago
- A simple remote procedure call module using ZeroMQ for python☆28Jan 11, 2020Updated 6 years ago
- A false-positive filter for variants called from massively parallel sequencing☆29May 30, 2017Updated 8 years ago
- Applications of nonequilibrium candidate Monte Carlo (NCMC) to ligand binding mode sampling☆34Nov 12, 2025Updated 6 months ago
- ☆69Jun 21, 2022Updated 3 years ago
- Simple Python parser for extracting HDL (VHDL or Verilog) documentation☆24Mar 1, 2024Updated 2 years ago
- Python bindings to bwa mem☆32Mar 26, 2020Updated 6 years ago
- Tools for finding mobile element insertions from single-end datasets☆24Dec 14, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13May 27, 2025Updated 11 months ago
- A SNP Visualizer - Javascript☆18Oct 22, 2014Updated 11 years ago
- Tools for manipulating biological data, particularly multiple sequence alignments☆160Apr 14, 2026Updated last month
- A little Python software that creates a color-sorted image from any image☆10Jun 12, 2017Updated 8 years ago
- ☆10May 17, 2017Updated 9 years ago
- A tool set for short variant discovery in genetic sequence data.☆205May 4, 2021Updated 5 years ago
- Jenkins for Life Science Continuous Integration☆12Apr 28, 2017Updated 9 years ago