gawbul / docker-sgeLinks
Dockerfile to build a container with SGE installed
☆24Updated 9 years ago
Alternatives and similar repositories for docker-sge
Users that are interested in docker-sge are comparing it to the libraries listed below
Sorting:
- Howto and implementation documentation☆22Updated last week
- [Historical] Reproducible Analyses for Bioinformatics☆106Updated 6 years ago
- Grid Engine on Compute Engine provides a shell script to manage a Compute Engine cluster along with instructions on how to install and c…☆22Updated 7 years ago
- Create cwl workflows by writing a simple Python script☆40Updated 5 years ago
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆30Updated 4 years ago
- dead Simple Queue - Slurm arrays for files with jobs in them.☆24Updated 3 years ago
- qtop (pronounced queue-top) is a tool written in order to monitor the state of Queueing Systems, along with related information relevant …☆41Updated 8 months ago
- Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs☆69Updated 3 years ago
- ☆17Updated last year
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆66Updated 5 years ago
- transparently build CWL and Galaxy XML tool definitions for any script that uses argparse☆27Updated 8 months ago
- BioContainers specifications☆51Updated 2 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆43Updated last year
- DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm☆49Updated 3 months ago
- Ansible playbook for managing UseGalaxy.eu infrastructure.☆22Updated last week
- Python wrapper around the C DRMAA library.☆108Updated 6 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- Galaxy Admin Training☆61Updated 7 months ago
- Request for comments on interchangeable bioinformatics containers☆40Updated 6 years ago
- A modification to the slurm_showq code written by TACC.☆43Updated 7 months ago
- Mulled - Automatized Containerized Software Repository☆66Updated last year
- convert a singularity image back to Docker, full circle! #containerfriends☆25Updated 5 years ago
- ☆87Updated 2 months ago
- A project to launch the galaxy docker image easily using ansible☆11Updated 5 years ago
- Introduction to Snakemake for Bioinformatics☆19Updated last week
- bioGUI provides install modules for bioinformatic software for users and allows developers to script a GUI for their applications.☆19Updated 9 months ago
- Library of snakemake rules.☆12Updated 6 years ago
- FAstqc DAta PArser - A minimal parser to parse FastQC output data.☆16Updated 9 years ago
- Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement☆29Updated 5 years ago
- Dockerfiles to build Biopython instances☆28Updated 8 years ago