python Circos
☆374Jun 14, 2024Updated 2 years ago
Alternatives and similar repositories for pyCircos
Users that are interested in pyCircos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)☆1,122Jun 14, 2026Updated 3 months ago
- Example notebooks of pyCircos☆29May 17, 2022Updated 4 years ago
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆110Dec 11, 2023Updated 2 years ago
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆39Feb 1, 2023Updated 3 years ago
- A genome visualization python package for comparative genomics☆425Jun 14, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A list of interesting genome browser and genome visualization programs☆1,107Jul 21, 2026Updated 2 months ago
- Tool to plot synteny and structural rearrangements between genomes☆356Jul 27, 2026Updated last month
- Genome-Genome circle synteny☆25Dec 1, 2023Updated 2 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 4 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- SV detection tool for nanopore sequence reads☆98Mar 25, 2026Updated 5 months ago
- Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method☆18Dec 29, 2022Updated 3 years ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 3 months ago
- A random forest classifier to identify contigs of plasmid origin in contig and scaffold genomes☆23Apr 20, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆23Mar 8, 2024Updated 2 years ago
- Plot structural variant signals from many BAMs and CRAMs☆573Jul 13, 2024Updated 2 years ago
- Bioinformatics tool for Locus Visualisation☆171Mar 30, 2026Updated 5 months ago
- Patchwork for matplotlib: A subplot manager for intuitive layouts in matplotlib and seaborn.☆437Dec 4, 2025Updated 9 months ago
- Fast alignment and preprocessing of chromatin profiles☆226Mar 20, 2026Updated 6 months ago
- A Circos-based tool to visualize genome assembly consistency or synteny between assemblies.☆98Nov 23, 2024Updated last year
- Creating alignment plots from bam files☆135Sep 14, 2026Updated last week
- Synteny and Rearrangement Identifier☆490Jul 1, 2026Updated 2 months ago
- Genomics 3D Visualizer☆14Jun 14, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- an R/shiny application for creation of Circos plot interactively☆156Sep 25, 2022Updated 3 years ago
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆42May 27, 2024Updated 2 years ago
- Python library to visualize circular plasmid maps☆27Dec 12, 2021Updated 4 years ago
- A grammar of graphics for comparative genomics☆782Sep 2, 2026Updated 3 weeks ago
- Genome browser and variant annotation☆399Aug 24, 2026Updated 3 weeks ago
- ☆15Apr 16, 2026Updated 5 months ago
- Standalone Python re-implementation of the POLCA polisher from MaSuRCA☆48Sep 9, 2026Updated last week
- Using Deep Learning to predict gene annotations☆307Jul 22, 2026Updated 2 months ago
- ☆42May 19, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆15May 16, 2026Updated 4 months ago
- Python library to plot DNA sequence features (e.g. from Genbank files)☆705Jul 2, 2025Updated last year
- Fast genome-wide functional annotation through orthology assignment☆782Aug 13, 2026Updated last month
- An updated pipeline for pangenome investigation☆377Jul 2, 2026Updated 2 months ago
- Assemble bacterial isolate genomes from Nanopore reads☆136Jan 22, 2025Updated last year
- Toolkit for calling structural variants using short or long reads☆118Aug 21, 2026Updated last month
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆589Sep 7, 2026Updated 2 weeks ago