Alternatives and similar repositories for pyCircos

Users that are interested in pyCircos are comparing it to the libraries listed below

• reneshbedre / bioinfokit
  Bioinformatics data analysis and visualization toolkit
  ☆366Updated last year
• DingWB / PyComplexHeatmap
  PyComplexHeatmap: A Python package to plot complex heatmap (clustermap)
  ☆368Updated this week
• mortazavilab / PyWGCNA
  PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
  ☆288Updated 11 months ago
• Marsilea-viz / marsilea
  Declarative creation of composable visualization for Python (Complex heatmap, Upset plot, Oncoprint and more~)
  ☆306Updated last week
• GangCaoLab / CoolBox
  Jupyter notebook based genomic data visualization toolkit.
  ☆249Updated 2 months ago
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆493Updated 2 weeks ago
• moshi4 / pyGenomeViz
  A genome visualization python package for comparative genomics
  ☆388Updated 2 months ago
• saketkc / pysradb
  Package for fetching metadata and downloading data from SRA/ENA/GEO
  ☆348Updated 2 months ago
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆234Updated 2 months ago
• maxplanck-ie / snakepipes
  Customizable workflows based on snakemake and python for the analysis of NGS data
  ☆397Updated 2 weeks ago
• vanheeringen-lab / genomepy
  genes and genomes at your fingertips
  ☆406Updated 4 months ago
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆140Updated 8 months ago
• moshi4 / pyCirclize
  Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
  ☆1,038Updated 4 months ago
• cggh / scikit-allel
  A Python package for exploring and analysing genetic variation data
  ☆312Updated last week
• zqfang / GSEApy
  Gene Set Enrichment Analysis in Python
  ☆689Updated last month
• ponnhide / pyCircos-examples
  Example notebooks of pyCircos
  ☆29Updated 3 years ago
• GoekeLab / bioinformatics-workflows
  minimal example implementations for bioinformatics workflow managers
  ☆280Updated 4 years ago
• fayjustin / computational_biology
  course material
  ☆135Updated 3 years ago
• bioconvert / bioconvert
  Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
  ☆386Updated 7 months ago
• sgkit-dev / sgkit
  Scalable genetics toolkit
  ☆274Updated 4 months ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆291Updated 7 months ago
• lmdu / pyfastx
  a python package for fast random access to sequences from plain and gzipped FASTA/Q files
  ☆289Updated 3 weeks ago
• vanheeringen-lab / seq2science
  Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…
  ☆167Updated 2 months ago
• deeptools / pyBigWig
  A python extension for quick access to bigWig and bigBed files
  ☆239Updated 3 weeks ago
• pachterlab / ffq
  A tool to find sequencing data and metadata from public databases.
  ☆593Updated last year
• deeptools / pyGenomeTracks
  python module to plot beautiful and highly customizable genome browser tracks
  ☆862Updated last year
• snakemake / snakemake-wrappers
  This is the development home of the Snakemake wrapper repository, see
  ☆238Updated last week
• jdblischak / smk-simple-slurm
  A simple Snakemake profile for Slurm without --cluster-config
  ☆165Updated last year
• Cloufield / gwaslab
  A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/
  ☆275Updated this week
• Shivi91 / Rosalind-1
  Solutions to Rosalind Bioinformatics Problems
  ☆76Updated 12 years ago